RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
GCOM1-203ENST00000460962 RMND1Q9NWS8 449 aa13.66□□□□□ -0.22
GCOM1-203ENST00000460962 MYO1AQ9UBC5 1043 aa13.66□□□□□ -0.22
GCOM1-203ENST00000460962 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
GCOM1-203ENST00000460962 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
GCOM1-203ENST00000460962 H3BQF6 201 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 USP5P45974 858 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 TRAPPC10P48553 1259 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 GYS2P54840 703 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 ADAM21Q9UKJ8 722 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
GCOM1-203ENST00000460962 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
GCOM1-203ENST00000460962 EXOC5O00471 708 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 ABL1P00519 1130 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 HSPA2P54652 639 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
GCOM1-203ENST00000460962 SRBD1Q8N5C6 995 aaKnown RBP13.65□□□□□ -0.22
GCOM1-203ENST00000460962 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
GCOM1-203ENST00000460962 RNF225M0QZC1 329 aaPredicted RBP13.65□□□□□ -0.23
GCOM1-203ENST00000460962 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.23
GCOM1-203ENST00000460962 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.23
GCOM1-203ENST00000460962 SCG2P13521 617 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 UBXN1Q04323 297 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 EXOC4Q96A65 974 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 MTRQ99707 1265 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 PDE11AQ9HCR9 933 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 MAPK8IP1Q9UQF2 711 aa13.65□□□□□ -0.23
GCOM1-203ENST00000460962 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 USP17L21D6R901 530 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
GCOM1-203ENST00000460962 LMAN1P49257 510 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 ABCB6Q9NP58 842 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 NTSR2O95665 410 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 ARHGAP25P42331 645 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
GCOM1-203ENST00000460962 CICQ96RK0 1608 aaPredicted RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 ZBTB22O15209 634 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 GDAQ9Y2T3 454 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 NMT2O60551 498 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 CAMTA2O94983 1202 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 FGRP09769 529 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 STAT6P42226 847 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 IL17AQ16552 155 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 VPS18Q9P253 973 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 L1RE1Q9UN81 338 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 PRCPP42785 496 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 VSNL1P62760 191 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 ZSCAN26Q16670 478 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 MUM1L1Q5H9M0 696 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 PSD3Q9NYI0 1048 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
GCOM1-203ENST00000460962 EPN1Q9Y6I3 576 aaPredicted RBP13.63□□□□□ -0.23
GCOM1-203ENST00000460962 DISP2A7MBM2 1401 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 H7C1D1 291 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 NDUFA10O95299 355 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 TUBBP07437 444 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 ATP6V1AP38606 617 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 CHP1Q99653 195 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 SUGCTQ9HAC7 445 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 COL1A1P02452 1464 aaPredicted RBP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
GCOM1-203ENST00000460962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
GCOM1-203ENST00000460962 ORC4O43929 436 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 CALML3P27482 149 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
GCOM1-203ENST00000460962 NCAPH2Q6IBW4 605 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 OR8K1Q8NGG5 319 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 ZBTB9Q96C00 473 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 LUC7L2Q9Y383 392 aaKnown RBP13.61□□□□□ -0.23
GCOM1-203ENST00000460962 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 TTC26A0AVF1 554 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 TULP2O00295 520 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
GCOM1-203ENST00000460962 AMPD2Q01433 879 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 EVX2Q03828 476 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
GCOM1-203ENST00000460962 NOA1Q8NC60 698 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms