RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MTERF2Q49AM1 385 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 FBLN7Q53RD9 439 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 XAGE3Q8WTP9 111 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 SLKQ9H2G2 1235 aaPredicted RBP4.18□□□□□ -1.74
HPS3-203ENST00000460822 FBRSQ9HAH7 460 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 PCDH12Q9NPG4 1184 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 PCDHB14Q9Y5E9 798 aa4.18□□□□□ -1.74
HPS3-203ENST00000460822 MARCH6O60337 910 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 SLITRK5O94991 958 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 GJB6O95452 261 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 EOMESO95936 686 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 CST3P01034 146 aaPredicted RBP4.17□□□□□ -1.74
HPS3-203ENST00000460822 CAP2P40123 477 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 CD96P40200 585 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 RPL6Q02878 288 aaKnown RBP4.17□□□□□ -1.74
HPS3-203ENST00000460822 SLBPQ14493 270 aaKnown RBP eCLIP4.17□□□□□ -1.74
HPS3-203ENST00000460822 LETMD1Q6P1Q0 360 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 RUFY4Q6ZNE9 571 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 FAM214BQ7L5A3 538 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 HOMER1Q86YM7 354 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 BRINP2Q9C0B6 783 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 TMEM260Q9NX78 707 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 POLR3KQ9Y2Y1 108 aaPredicted RBP4.17□□□□□ -1.74
HPS3-203ENST00000460822 PRKAB1Q9Y478 270 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 U3KQE9 123 aa4.17□□□□□ -1.74
HPS3-203ENST00000460822 B2RBV5 119 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 DDAH1O94760 285 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 CBX7O95931 251 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 CDK8P49336 464 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 CASP7P55210 303 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 ZP2Q05996 745 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 SQSTM1Q13501 440 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 CDKAL1Q5VV42 579 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 PRAMEF13Q5VWM6 474 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 SLC6A19Q695T7 634 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 SLC23A3Q6PIS1 610 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 KIAA0907Q7Z7F0 614 aaPredicted RBP4.16□□□□□ -1.74
HPS3-203ENST00000460822 MFSD4AQ8N468 514 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 RBBP8NLQ8NC74 664 aaPredicted RBP4.16□□□□□ -1.74
HPS3-203ENST00000460822 COX4I2Q96KJ9 171 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 ANTXR1Q9H6X2 564 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 KLHL42Q9P2K6 505 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 GFRA2O00451 464 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 RNASE1P07998 156 aaKnown RBP4.16□□□□□ -1.74
HPS3-203ENST00000460822 ITGB5P18084 799 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 ETV3P41162 512 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 NKG7Q16617 165 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 C6orf15Q6UXA7 325 aaPredicted RBP4.16□□□□□ -1.74
HPS3-203ENST00000460822 ATG4DQ86TL0 474 aaPredicted RBP4.16□□□□□ -1.74
HPS3-203ENST00000460822 SPACA3Q8IXA5 215 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 EHMT1Q9H9B1 1298 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 PFDN2Q9UHV9 154 aa4.16□□□□□ -1.74
HPS3-203ENST00000460822 PPP1R12AO14974 1030 aaPredicted RBP4.15□□□□□ -1.74
HPS3-203ENST00000460822 DIAPH1O60610 1272 aaKnown RBP4.15□□□□□ -1.74
HPS3-203ENST00000460822 PLCG1P19174 1290 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 GYS2P54840 703 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 NKPD1Q17RQ9 610 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 C2orf27AQ580R0 203 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 ARSHQ5FYA8 562 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 C16orf86Q6ZW13 317 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 SPATC1Q76KD6 591 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 TTC6Q86TZ1 520 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 CDH24Q86UP0 819 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 TMEM87BQ96K49 555 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 MBNL3Q9NUK0 354 aaKnown RBP4.15□□□□□ -1.74
HPS3-203ENST00000460822 ADAM30Q9UKF2 790 aa4.15□□□□□ -1.74
HPS3-203ENST00000460822 A0A1W2PQH9 124 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 H3BS24 57 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 ATE1O95260 518 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 KIR3DL1P43629 444 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 TKFCQ3LXA3 575 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 C22orf34Q6ZV56 151 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 NOL8Q76FK4 1167 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 WFDC3Q8IUB2 231 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 MRPL41Q8IXM3 137 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 RPUSD2Q8IZ73 545 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 LRRN4CLQ8ND94 238 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 THAP3Q8WTV1 239 aaPredicted RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 CCDC120Q96HB5 630 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 HSPA12BQ96MM6 686 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 FEZ1Q99689 392 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 LMCD1Q9NZU5 365 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 TJP2Q9UDY2 1190 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 KDM2BQ8NHM5 1336 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 PITPNM2Q9BZ72 1349 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 HTR3BO95264 441 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 GUCY2CP25092 1073 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 YARSP54577 528 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 AMPD3Q01432 767 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 SSRP1Q08945 709 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 MRM1Q6IN84 353 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 FAM178BQ8IXR5 827 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 C19orf47Q8N9M1 422 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 FAM13CQ8NE31 585 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 RIN3Q8TB24 985 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 FAM168AQ92567 244 aa4.14□□□□□ -1.75
HPS3-203ENST00000460822 DPH2Q9BQC3 489 aaPredicted RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 CARS2Q9HA77 564 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 METTL14Q9HCE5 456 aaKnown RBP4.14□□□□□ -1.75
HPS3-203ENST00000460822 CORINQ9Y5Q5 1042 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms