RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 RAD21O60216 631 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 NDUFB10O96000 172 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 NOVP48745 357 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 CCNA1P78396 465 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 IRF5Q13568 498 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 FAM83BQ5T0W9 1011 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 TBC1D10CQ8IV04 446 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 MB21D1Q8N884 522 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 GMCL1P1Q8NEA9 526 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 PORCNQ9H237 461 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 RNF41Q9H4P4 317 aaPredicted RBP19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 TOMM22Q9NS69 142 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 ADAMTS5Q9UNA0 930 aa19.47■□□□□ 0.71
SMARCD3-204ENST00000460431 A0A0G2JMZ2 1700 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 SGSM2O43147 1006 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 NMT2O60551 498 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 BMP2KLQ5H9B9 411 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 RRP12Q5JTH9 1297 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 TCP11L1Q9NUJ3 509 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
SMARCD3-204ENST00000460431 GJB1P08034 283 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 CCL5P13501 91 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 CCAR1Q8IX12 1150 aaKnown RBP19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 LRRC47Q8N1G4 583 aaKnown RBP19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 PXYLP1Q8TE99 480 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 ATG4CQ96DT6 458 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 NUP88Q99567 741 aaPredicted RBP19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 STX8Q9UNK0 236 aa19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 ZNFX1Q9P2E3 1918 aaKnown RBP19.45■□□□□ 0.7
SMARCD3-204ENST00000460431 ADCY3O60266 1144 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 NT5C2P49902 561 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 GPR142Q7Z601 462 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 PLEKHH3Q7Z736 793 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 NKX2-3Q8TAU0 364 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 BIN2Q9UBW5 565 aaPredicted RBP19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 PPP1R9AQ9ULJ8 1098 aa19.44■□□□□ 0.7
SMARCD3-204ENST00000460431 ELNP15502 786 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 GJA8P48165 433 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 UBXN2AP68543 259 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 PTH1RQ03431 593 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 SLFN13Q68D06 897 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 NUDT12Q9BQG2 462 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 MOV10L1Q9BXT6 1211 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 RNF208Q9H0X6 261 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 NEDD4P46934 1319 aa19.43■□□□□ 0.7
SMARCD3-204ENST00000460431 VWA5AO00534 786 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 MORN1Q5T089 497 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 PRPF38AQ8NAV1 312 aaKnown RBP19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 SOCS4Q8WXH5 440 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 ESR2Q92731 530 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 USP6NLQ92738 828 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 GMCL1Q96IK5 515 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 UNC93B1Q9H1C4 597 aa19.42■□□□□ 0.7
SMARCD3-204ENST00000460431 BMP3P12645 472 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 XRCC5P13010 732 aaKnown RBP19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 TMEM132BQ14DG7 1078 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 UBE2Q1Q7Z7E8 422 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 SHCBP1Q8NEM2 672 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 TTC14Q96N46 770 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 FEM1BQ9UK73 627 aa19.41■□□□□ 0.7
SMARCD3-204ENST00000460431 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 PTPREP23469 700 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 MCCP23508 829 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 PLS1Q14651 629 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 RCSD1Q6JBY9 416 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 U2AF1L4Q8WU68 220 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 MAP4K1Q92918 833 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 TMEM47Q9BQJ4 181 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 CWC22Q9HCG8 908 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 PPP4R2Q9NY27 417 aa19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-204ENST00000460431 B4E1Z4 1266 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 STRNO43815 780 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 KDM4AO75164 1064 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 INHAP05111 366 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 ERCC3P19447 782 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 CYP2B6P20813 491 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 SLC1A4P43007 532 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 WDR78Q5VTH9 848 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 ESYT1Q9BSJ8 1104 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 KRT23Q9C075 422 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 CNNM2Q9H8M5 875 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 ZSWIM5Q9P217 1185 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 ZNF214Q9UL59 606 aaPredicted RBP19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
SMARCD3-204ENST00000460431 TMEM232C9JQI7 657 aa19.38■□□□□ 0.69
SMARCD3-204ENST00000460431 PLA2G6O60733 806 aa19.38■□□□□ 0.69
SMARCD3-204ENST00000460431 SGPL1O95470 568 aa19.38■□□□□ 0.69
SMARCD3-204ENST00000460431 SLC25A27O95847 323 aa19.38■□□□□ 0.69
SMARCD3-204ENST00000460431 CYP21A2P08686 494 aa19.38■□□□□ 0.69
SMARCD3-204ENST00000460431 STAT3P40763 770 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms