RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 POTEB2H3BUK9 544 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 EEF2P13639 858 aaKnown RBP18.2■□□□□ 0.5
LMNA-209ENST00000459904 LRRC41Q15345 812 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 OLFML2BQ68BL8 750 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 MAML3Q96JK9 1138 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
LMNA-209ENST00000459904 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
LMNA-209ENST00000459904 TRIM43BA6NCK2 446 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 MSCO60682 206 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 PGK1P00558 417 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 ITGB8P26012 769 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 HSP90AB4PQ58FF6 505 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 TRIM43Q96BQ3 446 aaPredicted RBP18.19■□□□□ 0.5
LMNA-209ENST00000459904 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
LMNA-209ENST00000459904 SEPT4O43236 478 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 STRNO43815 780 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 IRX5P78411 483 aaPredicted RBP18.18■□□□□ 0.5
LMNA-209ENST00000459904 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 C12orf60Q5U649 245 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 ARRDC4Q8NCT1 418 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 PRKAG2Q9UGJ0 569 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 SLC4A4Q9Y6R1 1079 aa18.18■□□□□ 0.5
LMNA-209ENST00000459904 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
LMNA-209ENST00000459904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.17■□□□□ 0.5
LMNA-209ENST00000459904 MMP19Q99542 508 aa18.17■□□□□ 0.5
LMNA-209ENST00000459904 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
LMNA-209ENST00000459904 PUS7LQ9H0K6 701 aaKnown RBP18.17■□□□□ 0.5
LMNA-209ENST00000459904 SWAP70Q9UH65 585 aa18.17■□□□□ 0.5
LMNA-209ENST00000459904 FCER1AP12319 257 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 EPHB4P54760 987 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 TLE2Q04725 743 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 C16orf86Q6ZW13 317 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
LMNA-209ENST00000459904 MROH8Q9H579 483 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
LMNA-209ENST00000459904 WDR46O15213 610 aaKnown RBP18.15■□□□□ 0.5
LMNA-209ENST00000459904 ATP5JP18859 108 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 TSHZ3Q63HK5 1081 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 HAUS7Q99871 368 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 GBF1Q92538 1859 aa18.15■□□□□ 0.5
LMNA-209ENST00000459904 ZNF697Q5TEC3 545 aa18.14■□□□□ 0.49
LMNA-209ENST00000459904 TMED8Q6PL24 325 aaPredicted RBP18.14■□□□□ 0.49
LMNA-209ENST00000459904 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
LMNA-209ENST00000459904 RPAP2Q8IXW5 612 aaPredicted RBP18.14■□□□□ 0.49
LMNA-209ENST00000459904 REPS2Q8NFH8 660 aa18.14■□□□□ 0.49
LMNA-209ENST00000459904 MYLIPQ8WY64 445 aa18.14■□□□□ 0.49
LMNA-209ENST00000459904 CDX2Q99626 313 aaPredicted RBP18.14■□□□□ 0.49
LMNA-209ENST00000459904 TTYH1Q9H313 450 aaPredicted RBP18.14■□□□□ 0.49
LMNA-209ENST00000459904 VWA5AO00534 786 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 STAT3P40763 770 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 SNX17Q15036 470 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 ZNF792Q3KQV3 632 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
LMNA-209ENST00000459904 PPP1R9AQ9ULJ8 1098 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 ADAMTS5Q9UNA0 930 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 RIPK3Q9Y572 518 aa18.13■□□□□ 0.49
LMNA-209ENST00000459904 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
LMNA-209ENST00000459904 RAB11FIP3O75154 756 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 ZNF865P0CJ78 1059 aaPredicted RBP18.12■□□□□ 0.49
LMNA-209ENST00000459904 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
LMNA-209ENST00000459904 RIOX2Q8IUF8 465 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 ABRAQ8N0Z2 381 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 TINF2Q9BSI4 451 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 SH2D4AQ9H788 454 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
LMNA-209ENST00000459904 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 HMMRO75330 724 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 SLC25A27O95847 323 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 RARBP10826 455 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 RASA1P20936 1047 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■■■ 29.7
LMNA-209ENST00000459904 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
LMNA-209ENST00000459904 A0A1W2PQ45 241 aaPredicted RBP18.1■□□□□ 0.49
LMNA-209ENST00000459904 A0A1W2PQY0 241 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 PRDM1O75626 825 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 KCTD2Q14681 263 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 CPXCR1Q8N123 301 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 GOPCQ9HD26 462 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
LMNA-209ENST00000459904 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
LMNA-209ENST00000459904 ADCY6O43306 1168 aa18.09■□□□□ 0.49
LMNA-209ENST00000459904 NDUFB10O96000 172 aa18.09■□□□□ 0.49
LMNA-209ENST00000459904 UBE3CQ15386 1083 aa18.09■□□□□ 0.49
LMNA-209ENST00000459904 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
LMNA-209ENST00000459904 AMOTL1Q8IY63 956 aa18.09■□□□□ 0.49
LMNA-209ENST00000459904 OSBP2Q969R2 916 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms