RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 GMCL1P1Q8NEA9 526 aa24.53■■□□□ 1.52
VARS-218ENST00000459667 CWC22Q9HCG8 908 aaKnown RBP24.53■■□□□ 1.52
VARS-218ENST00000459667 IL17RBQ9NRM6 502 aa24.53■■□□□ 1.52
VARS-218ENST00000459667 FBXO28Q9NVF7 368 aa24.53■■□□□ 1.52
VARS-218ENST00000459667 CTNNA3Q9UI47 895 aa24.53■■□□□ 1.52
VARS-218ENST00000459667 PLXNB2O15031 1838 aa24.52■■□□□ 1.52
VARS-218ENST00000459667 ADCY3O60266 1144 aa24.52■■□□□ 1.52
VARS-218ENST00000459667 IMMTQ16891 758 aaKnown RBP24.52■■□□□ 1.52
VARS-218ENST00000459667 GPR142Q7Z601 462 aa24.52■■□□□ 1.52
VARS-218ENST00000459667 WDR78Q5VTH9 848 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 PLEKHH3Q7Z736 793 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 PXYLP1Q8TE99 480 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 SOCS4Q8WXH5 440 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 BIN2Q9UBW5 565 aaPredicted RBP24.51■■□□□ 1.51
VARS-218ENST00000459667 GJD2Q9UKL4 321 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 PPP1R9AQ9ULJ8 1098 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 NEDD4P46934 1319 aa24.51■■□□□ 1.51
VARS-218ENST00000459667 RBBP6Q7Z6E9 1792 aaKnown RBP24.5■■□□□ 1.51
VARS-218ENST00000459667 SGSM2O43147 1006 aa24.5■■□□□ 1.51
VARS-218ENST00000459667 MYCP01106 439 aaPredicted RBP24.5■■□□□ 1.51
VARS-218ENST00000459667 ELNP15502 786 aa24.5■■□□□ 1.51
VARS-218ENST00000459667 BMP2KLQ5H9B9 411 aa24.5■■□□□ 1.51
VARS-218ENST00000459667 SLFN13Q68D06 897 aa24.5■■□□□ 1.51
VARS-218ENST00000459667 NUDT12Q9BQG2 462 aa24.5■■□□□ 1.51
VARS-218ENST00000459667 COL11A1P12107 1806 aaPredicted RBP24.49■■□□□ 1.51
VARS-218ENST00000459667 RGS19P49795 217 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 PLS1Q14651 629 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 ESR2Q92731 530 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 SLF1Q9BQI6 1058 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 MOV10L1Q9BXT6 1211 aaKnown RBP24.49■■□□□ 1.51
VARS-218ENST00000459667 SPATC1LQ9H0A9 340 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 TCP11L1Q9NUJ3 509 aa24.49■■□□□ 1.51
VARS-218ENST00000459667 NOVP48745 357 aa24.48■■□□□ 1.51
VARS-218ENST00000459667 UBXN2AP68543 259 aa24.48■■□□□ 1.51
VARS-218ENST00000459667 TMEM106CQ9BVX2 250 aa24.48■■□□□ 1.51
VARS-218ENST00000459667 ADAMTS5Q9UNA0 930 aa24.48■■□□□ 1.51
VARS-218ENST00000459667 VWA5AO00534 786 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 BMP3P12645 472 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 PTH1RQ03431 593 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 NKX2-3Q8TAU0 364 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 PPP4R2Q9NY27 417 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 ISY1Q9ULR0 285 aaKnown RBP24.47■■□□□ 1.51
VARS-218ENST00000459667 IVNS1ABPQ9Y6Y0 642 aa24.47■■□□□ 1.51
VARS-218ENST00000459667 POTEFA5A3E0 1075 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 CYP2B6P20813 491 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 SLC1A4P43007 532 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 NT5C2P49902 561 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 TMEM132BQ14DG7 1078 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 MTFR1Q15390 333 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 MORN1Q5T089 497 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 SHCBP1Q8NEM2 672 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 GMCL1Q96IK5 515 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 FEM1BQ9UK73 627 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 CENPFP49454 3210 aa24.46■■□□□ 1.51
VARS-218ENST00000459667 KDM4AO75164 1064 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 INHAP05111 366 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 ERCC3P19447 782 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 MCCP23508 829 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 RGS2P41220 211 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 PRPF38AQ8NAV1 312 aaKnown RBP24.45■■□□□ 1.5
VARS-218ENST00000459667 USP6NLQ92738 828 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 CHMP4CQ96CF2 233 aa24.45■■□□□ 1.5
VARS-218ENST00000459667 U3KPZ7 1027 aaPredicted RBP24.45■■□□□ 1.5
VARS-218ENST00000459667 SLC15A5A6NIM6 579 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 B4E1Z4 1266 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 TOP1P11387 765 aaKnown RBP24.44■■□□□ 1.5
VARS-218ENST00000459667 PTPREP23469 700 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 MAP2K5Q13163 448 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 NCAPG2Q86XI2 1143 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 REPS2Q8NFH8 660 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 KIFC2Q96AC6 838 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 APBA2Q99767 749 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 TMEM47Q9BQJ4 181 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 MTMR7Q9Y216 660 aa24.44■■□□□ 1.5
VARS-218ENST00000459667 KIAA0100Q14667 2235 aaKnown RBP24.44■■□□□ 1.5
VARS-218ENST00000459667 TMEM232C9JQI7 657 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 HMGCRP04035 888 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 XRCC5P13010 732 aaKnown RBP24.43■■□□□ 1.5
VARS-218ENST00000459667 CCL5P13501 91 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 GRB14Q14449 540 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 ZKSCAN3Q9BRR0 538 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 KRT23Q9C075 422 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 MROH8Q9H579 483 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 CNNM2Q9H8M5 875 aa24.43■■□□□ 1.5
VARS-218ENST00000459667 ZNF214Q9UL59 606 aaPredicted RBP24.43■■□□□ 1.5
VARS-218ENST00000459667 ZNF236Q9UL36 1845 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 SLC25A27O95847 323 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 STAT3P40763 770 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 STAT2P52630 851 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 MLLT1Q03111 559 aaPredicted RBP24.42■■□□□ 1.5
VARS-218ENST00000459667 IKQ13123 557 aaPredicted RBP24.42■■□□□ 1.5
VARS-218ENST00000459667 RCSD1Q6JBY9 416 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 KIAA1211Q6ZU35 1233 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 RASGRP2Q7LDG7 609 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 IQCA1Q86XH1 822 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 TRIB2Q92519 343 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 TTC14Q96N46 770 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 ESYT1Q9BSJ8 1104 aa24.42■■□□□ 1.5
VARS-218ENST00000459667 CTDP1Q9Y5B0 961 aaPredicted RBP24.42■■□□□ 1.5
VARS-218ENST00000459667 ZBED4O75132 1171 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms