RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LTBP3Q9NS15 1303 aa4.86□□□□□ -1.63
SCARNA18-201ENST00000459004 C9IYK1 514 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 DNAJA1P31689 397 aaKnown RBP4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 SNW1Q13573 536 aaKnown RBP4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 PPP2R5EQ16537 467 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 TMC3Q7Z5M5 1100 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 CCDC120Q96HB5 630 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 HDAC8Q9BY41 377 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 RC3H2Q9HBD1 1191 aaKnown RBP4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 PRDM7Q9NQW5 492 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 ADAMTS6Q9UKP5 1117 aa4.85□□□□□ -1.63
SCARNA18-201ENST00000459004 SIGLEC6O43699 453 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 TP53P04637 393 aaPredicted RBP4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 FGRP09769 529 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 LTKP29376 864 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 EGR3Q06889 387 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 GNPTABQ3T906 1256 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 NAALADL2Q58DX5 795 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 TDRD10Q5VZ19 366 aaKnown RBP4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 ATG4DQ86TL0 474 aaPredicted RBP4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 PPFIBP1Q86W92 1011 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 USHBP1Q8N6Y0 703 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 ZNF655Q8N720 491 aaPredicted RBP4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 FAM169BQ8N8A8 192 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 TCTN2Q96GX1 697 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 CHST7Q9NS84 486 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 MRVI1Q9Y6F6 885 aa4.84□□□□□ -1.63
SCARNA18-201ENST00000459004 SSU72P8A0A1W2PR75 194 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 BIN1O00499 593 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 SHOXO15266 292 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 TAL1P17542 331 aaPredicted RBP4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 SLC7A5Q01650 507 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 TCEAL1Q15170 157 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 TNNI3KQ59H18 835 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 AXDND1Q5T1B0 1012 aaPredicted RBP4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 DCAF15Q66K64 600 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 RNF111Q6ZNA4 994 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 MCF2L2Q86YR7 1114 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 LRRN4CLQ8ND94 238 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 SYTL4Q96C24 671 aaPredicted RBP4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 C8orf37Q96NL8 207 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 ALPK1Q96QP1 1244 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 GFOD1Q9NXC2 390 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 PRKAG3Q9UGI9 489 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 PCDHA11Q9Y5I1 949 aa4.83□□□□□ -1.64
SCARNA18-201ENST00000459004 SMAD7O15105 426 aaKnown RBP4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 CD247P20963 164 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 ETFBP38117 255 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 GDNFP39905 211 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 PCBP3P57721 371 aaKnown RBP4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 NOL9Q5SY16 702 aaKnown RBP4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 VHLLQ6RSH7 139 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 LINC00116Q8NCU8 138 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 FLAD1Q8NFF5 587 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 ZNF408Q9H9D4 720 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 GP6Q9HCN6 339 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 SLAMF8Q9P0V8 285 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 PCDHB10Q9UN67 800 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 CTNND2Q9UQB3 1225 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 ZNF451Q9Y4E5 1061 aa4.82□□□□□ -1.64
SCARNA18-201ENST00000459004 DNAJC25-GNG10A0A024R161 153 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 A0A087WZG4 1122 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 ITGA4P13612 1032 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 JUNBP17275 347 aaPredicted RBP4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 AFMP43652 599 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 TEKQ02763 1124 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 RALGPS1Q5JS13 557 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 HEATR6Q6AI08 1181 aaKnown RBP4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 MCTP1Q6DN14 999 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 KIAA1211LQ6NV74 962 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 KLHL6Q8WZ60 621 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 HAUS7Q99871 368 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 DSCC1Q9BVC3 393 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 ADAMTS10Q9H324 1103 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 FAM86C1Q9NVL1 165 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 TMEM59LQ9UK28 342 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 TCFL5Q9UL49 500 aa4.81□□□□□ -1.64
SCARNA18-201ENST00000459004 MEIS1O00470 390 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 GSNP06396 782 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 SYPP08247 313 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 ITGB5P18084 799 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 BMP8BP34820 402 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 ZNF445P59923 1031 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 NCAPHQ15003 741 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 NPM2Q86SE8 214 aaKnown RBP4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 FOXP3Q9BZS1 431 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 GBP3Q9H0R5 595 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 C19orf73Q9NVV2 129 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 WHRNQ9P202 907 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 MINPP1Q9UNW1 487 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 DIS3Q9Y2L1 958 aaKnown RBP4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 ZNF281Q9Y2X9 895 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 R3HCC1Q9Y3T6 440 aaKnown RBP4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 FHOD1Q9Y613 1164 aa4.8□□□□□ -1.64
SCARNA18-201ENST00000459004 CBFA2T2O43439 604 aa4.79□□□□□ -1.64
SCARNA18-201ENST00000459004 PAPLNO95428 1278 aa4.79□□□□□ -1.64
SCARNA18-201ENST00000459004 ZGLP1P0C6A0 271 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms