RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CASP14P31944 242 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 NR5A1Q13285 461 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 CHRNA2Q15822 529 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 FILIP1LQ4L180 1135 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 ZNF569Q5MCW4 686 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 TMTC2Q8N394 836 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 ZCRB1Q8TBF4 217 aaKnown RBP9.62□□□□□ -0.87
VPS50-208ENST00000458707 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 PAGE5Q96GU1 130 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 TRIM34Q9BYJ4 488 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 NAPBQ9H115 298 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 PDE11AQ9HCR9 933 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 ABCB6Q9NP58 842 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 INCENPQ9NQS7 918 aa9.62□□□□□ -0.87
VPS50-208ENST00000458707 BSDC1Q9NW68 430 aaPredicted RBP9.62□□□□□ -0.87
VPS50-208ENST00000458707 PUF60Q9UHX1 559 aaKnown RBP9.62□□□□□ -0.87
VPS50-208ENST00000458707 DISP2A7MBM2 1401 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 MYH10P35580 1976 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 A0A087X0B3 334 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 ANKRD18BA2A2Z9 1011 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 GSG1L2A8MUP6 293 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 MYO1CO00159 1063 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 MAFGO15525 162 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 IVLP07476 585 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 ARHGAP25P42331 645 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 PHKA1P46020 1223 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 LMAN1P49257 510 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 FXR1P51114 621 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS50-208ENST00000458707 GYS2P54840 703 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 AMPD2Q01433 879 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 WTAPQ15007 396 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 PPP2R5BQ15173 497 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 WDR93Q6P2C0 686 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 MFSD6Q6ZSS7 791 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 SRLQ86TD4 932 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 SLC35F6Q8N357 371 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 FAM71BQ8TC56 605 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 FERMT2Q96AC1 680 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 NAPGQ99747 312 aaPredicted RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 GREM2Q9H772 168 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 ZSWIM4Q9H7M6 989 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 BRMS1Q9HCU9 246 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 LIMA1Q9UHB6 759 aaKnown RBP9.61□□□□□ -0.87
VPS50-208ENST00000458707 DUOX1Q9NRD9 1551 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
VPS50-208ENST00000458707 IRF6O14896 467 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 BMP15O95972 392 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 CCDC172P0C7W6 258 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 FGFR2P21802 821 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 CTSWP56202 376 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 ERVK-24P63145 666 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 MAP2K1Q02750 393 aaPredicted RBP9.6□□□□□ -0.87
VPS50-208ENST00000458707 TRIM14Q14142 442 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 KIF4BQ2VIQ3 1234 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
VPS50-208ENST00000458707 KIF6Q6ZMV9 814 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 FANCBQ8NB91 859 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 VPS18Q9P253 973 aa9.6□□□□□ -0.87
VPS50-208ENST00000458707 CTAGE15A4D2H0 777 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 TRIM75PA6NK02 468 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 MBD4O95243 580 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CTAGE8P0CG41 777 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 GNAT2P19087 354 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 VSNL1P62760 191 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CACNA1SQ13698 1873 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 MCM6Q14566 821 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CASP8Q14790 479 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 ZNF772Q68DY9 489 aaPredicted RBP9.59□□□□□ -0.87
VPS50-208ENST00000458707 CYP26C1Q6V0L0 522 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 LEKR1Q6ZMV7 388 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CTAGE6Q86UF2 777 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CTAGE4Q8IX94 777 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 SHISA4Q96DD7 197 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CDC5LQ99459 802 aaKnown RBP9.59□□□□□ -0.87
VPS50-208ENST00000458707 VIPAS39Q9H9C1 493 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CABP5Q9NP86 173 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 MED4Q9NPJ6 270 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 CNNM1Q9NRU3 951 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 ABHD10Q9NUJ1 306 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 COL5A2P05997 1499 aaPredicted RBP9.59□□□□□ -0.87
VPS50-208ENST00000458707 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.87
VPS50-208ENST00000458707 NOP2P46087 812 aaKnown RBP9.59□□□□□ -0.87
VPS50-208ENST00000458707 STX17P56962 302 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 SPAG1Q07617 926 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 MAP3K12Q12852 859 aa9.59□□□□□ -0.87
VPS50-208ENST00000458707 PUM3Q15397 648 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms