RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 FUT2Q10981 343 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 RASA3Q14644 834 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 TBC1D10BQ4KMP7 808 aaPredicted RBP10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 TMEM92Q6UXU6 159 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 BRAPQ7Z569 592 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 NBPF11Q86T75 865 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF713Q8N859 430 aaPredicted RBP10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 GMCL1P1Q8NEA9 526 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 ALG1Q9BT22 464 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 SLC26A6Q9BXS9 759 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 TMEM39BQ9GZU3 492 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 ASNSP08243 561 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 SAFBQ15424 915 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 SKOR2Q2VWA4 1001 aaPredicted RBP10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 CDC37L1Q7L3B6 337 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 SAMD7Q7Z3H4 446 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 RAB11FIP4Q86YS3 637 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 CCDC144CPQ8IYA2 1237 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 GMCL1Q96IK5 515 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 TEPSINQ96N21 525 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 DEFB129Q9H1M3 183 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 SH3GLB2Q9NR46 395 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 CNTNAP5Q8WYK1 1306 aa10.32□□□□□ -0.76
CDC42EP3-204ENST00000457889 SHTN1A0MZ66 631 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 PDHBP11177 359 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 KRT85P78386 507 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 SUPT20HL1Q3ZLR7 823 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 CCDC12Q8WUD4 166 aaPredicted RBP10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 PHKBQ93100 1093 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 MAD2L2Q9UI95 211 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZBTB21Q9ULJ3 1066 aa10.31□□□□□ -0.76
CDC42EP3-204ENST00000457889 SCN4AP35499 1836 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 GLTPD2A6NH11 291 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 CTNND1O60716 968 aaKnown RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 PLEKHA8P1O95397 391 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 EGFRP00533 1210 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 GH2P01242 217 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 SCG2P13521 617 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 CALML3P27482 149 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 CAP2P40123 477 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 EPS15P42566 896 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF543Q08ER8 600 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 RESTQ13127 1097 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 PFKFB3Q16875 520 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 GALNT17Q6IS24 598 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 SRBD1Q8N5C6 995 aaKnown RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 CCDC148Q8NFR7 591 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 TRPM4Q8TD43 1214 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 ZNF341Q9BYN7 854 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 FOXP1Q9H334 677 aaPredicted RBP10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 ELP1O95163 1332 aa10.3□□□□□ -0.76
CDC42EP3-204ENST00000457889 MYH4Q9Y623 1939 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 FAM196BA6NMK8 535 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 MBD3O95983 291 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 MMP1P03956 469 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 EEF2P13639 858 aaKnown RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 GUCY1A2P33402 732 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 TRAF1Q13077 416 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 SEPT2Q15019 361 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 KRT40Q6A162 431 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 SULF1Q8IWU6 871 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 RRP36Q96EU6 259 aaKnown RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 RIOX1Q9H6W3 641 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 TMX2Q9Y320 296 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 V9GY48 417 aaPredicted RBP10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 MYH6P13533 1939 aa10.29□□□□□ -0.76
CDC42EP3-204ENST00000457889 PHF20L1A8MW92 1017 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 PLA2G6O60733 806 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 GDF11O95390 407 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 SLC1A4P43007 532 aa10.28□□□□□ -0.76
CDC42EP3-204ENST00000457889 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms