RNA–Protein interactions for RNA: ENST00000457079.1

LINC00885-201, long intergenic non-protein coding RNA 885, humanhuman

TSL 2 BASIC

Gene LINC00885, Length 1,828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00885-201ENST00000457079 HLA-DOAP06340 250 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
LINC00885-201ENST00000457079 CALML3P27482 149 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 SPECC1Q5M775 1068 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 PCDHA4Q9UN74 947 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 MYH6P13533 1939 aa12.45□□□□□ -0.42
LINC00885-201ENST00000457079 SMARCA1P28370 1054 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 TRAPPC10P48553 1259 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 TCP10Q12799 353 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 PIK3AP1Q6ZUJ8 805 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 FAM177A1Q8N128 213 aaPredicted RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 DAGLBQ8NCG7 672 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 DHX36Q9H2U1 1008 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 NOL7Q9UMY1 257 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 SIPA1L1O43166 1804 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 ATRNL1Q5VV63 1379 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 GREB1LQ9C091 1923 aaPredicted RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 TTLL1O95922 423 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 BMP15O95972 392 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 RBM5P52756 815 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 TTC38Q5R3I4 469 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 METTL16Q86W50 562 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 BLIDQ8IZY5 108 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 GMLQ99445 158 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 ZNF277Q9NRM2 450 aaPredicted RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 ANO10Q9NW15 660 aa12.44□□□□□ -0.42
LINC00885-201ENST00000457079 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
LINC00885-201ENST00000457079 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
LINC00885-201ENST00000457079 DPCR1Q3MIW9 517 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 CFAP100Q494V2 611 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
LINC00885-201ENST00000457079 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
LINC00885-201ENST00000457079 CSRNP2Q9H175 543 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 RIOX1Q9H6W3 641 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
LINC00885-201ENST00000457079 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 KIF13BQ9NQT8 1826 aa12.43□□□□□ -0.42
LINC00885-201ENST00000457079 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 ZNF174Q15697 407 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 ASPRV1Q53RT3 343 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 ZSCAN30Q86W11 494 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 CCDC148Q8NFR7 591 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
LINC00885-201ENST00000457079 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
LINC00885-201ENST00000457079 PSMD14O00487 310 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 ENTPD3O75355 529 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 RAD17O75943 681 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 ZBTB7AO95365 584 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 PTGDRQ13258 359 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 FOXP4Q8IVH2 680 aaPredicted RBP12.41□□□□□ -0.42
LINC00885-201ENST00000457079 FERMT2Q96AC1 680 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
LINC00885-201ENST00000457079 PIGSQ96S52 555 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 ZMYND12Q9H0C1 365 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 A0A087X0B3 334 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 FOXN1O15353 648 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 ACTN4O43707 911 aaKnown RBP12.41□□□□□ -0.42
LINC00885-201ENST00000457079 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 PNOCQ13519 176 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 C4orf32Q8N8J7 132 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
LINC00885-201ENST00000457079 PSME4Q14997 1843 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
LINC00885-201ENST00000457079 NLRP12P59046 1061 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 IL17AQ16552 155 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 BPIFA3Q9BQP9 254 aa12.4□□□□□ -0.42
LINC00885-201ENST00000457079 BIN1O00499 593 aa12.39□□□□□ -0.43
LINC00885-201ENST00000457079 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms