RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CTDP1Q9Y5B0 961 aaPredicted RBP27.38■■□□□ 1.97
CBX3-204ENST00000456948 DOCK3Q8IZD9 2030 aa27.38■■□□□ 1.97
CBX3-204ENST00000456948 PLS1Q14651 629 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 GPR142Q7Z601 462 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 ESR2Q92731 530 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 INCENPQ9NQS7 918 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 BTBD7Q9P203 1132 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 GJD2Q9UKL4 321 aa27.37■■□□□ 1.97
CBX3-204ENST00000456948 MYH4Q9Y623 1939 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 CNMDO75829 334 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 SLFN13Q68D06 897 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 PRPF38AQ8NAV1 312 aaKnown RBP27.36■■□□□ 1.97
CBX3-204ENST00000456948 SLF1Q9BQI6 1058 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 SPATC1LQ9H0A9 340 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 PORCNQ9H237 461 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 PPP1R9AQ9ULJ8 1098 aa27.36■■□□□ 1.97
CBX3-204ENST00000456948 ISY1Q9ULR0 285 aaKnown RBP27.36■■□□□ 1.97
CBX3-204ENST00000456948 PEX10O60683 326 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 XRCC5P13010 732 aaKnown RBP27.35■■□□□ 1.97
CBX3-204ENST00000456948 RGS2P41220 211 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 CCDC178Q5BJE1 867 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 LRRC47Q8N1G4 583 aaKnown RBP27.35■■□□□ 1.97
CBX3-204ENST00000456948 SHCBP1Q8NEM2 672 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 ATG4CQ96DT6 458 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 MROH8Q9H579 483 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 TCP11L1Q9NUJ3 509 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 FEM1BQ9UK73 627 aa27.35■■□□□ 1.97
CBX3-204ENST00000456948 STRNO43815 780 aa27.34■■□□□ 1.97
CBX3-204ENST00000456948 SLC25A27O95847 323 aa27.34■■□□□ 1.97
CBX3-204ENST00000456948 KIAA1211Q6ZU35 1233 aa27.34■■□□□ 1.97
CBX3-204ENST00000456948 NKX2-3Q8TAU0 364 aa27.34■■□□□ 1.97
CBX3-204ENST00000456948 KIAA0100Q14667 2235 aaKnown RBP27.34■■□□□ 1.97
CBX3-204ENST00000456948 SLC15A5A6NIM6 579 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 ZBED4O75132 1171 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 BMP3P12645 472 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 EN2P19622 333 aaPredicted RBP27.33■■□□□ 1.97
CBX3-204ENST00000456948 CYP2B6P20813 491 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 COPB2P35606 906 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 SLC1A4P43007 532 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 POTEEQ6S8J3 1075 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 IQCA1Q86XH1 822 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 CHURC1Q8WUH1 139 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 TTC14Q96N46 770 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 MOV10L1Q9BXT6 1211 aaKnown RBP27.33■■□□□ 1.97
CBX3-204ENST00000456948 CNNM2Q9H8M5 875 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 IL17RBQ9NRM6 502 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 ADAMTS5Q9UNA0 930 aa27.33■■□□□ 1.97
CBX3-204ENST00000456948 VWA5AO00534 786 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 HMGCRP04035 888 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 FDX1P10109 184 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 ELNP15502 786 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 NUP88Q99567 741 aaPredicted RBP27.32■■□□□ 1.96
CBX3-204ENST00000456948 KRT23Q9C075 422 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 FBXO28Q9NVF7 368 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 SLC5A4Q9NY91 659 aa27.32■■□□□ 1.96
CBX3-204ENST00000456948 INHAP05111 366 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 TOP1P11387 765 aaKnown RBP27.31■■□□□ 1.96
CBX3-204ENST00000456948 CAPN2P17655 700 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 PTPREP23469 700 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 IKQ13123 557 aaPredicted RBP27.31■■□□□ 1.96
CBX3-204ENST00000456948 ERICH6BQ5W0A0 696 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 CASC1Q6TDU7 716 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 NCAPG2Q86XI2 1143 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 GMCL1Q96IK5 515 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 RNF208Q9H0X6 261 aa27.31■■□□□ 1.96
CBX3-204ENST00000456948 U3KPZ7 1027 aaPredicted RBP27.31■■□□□ 1.96
CBX3-204ENST00000456948 CCL5P13501 91 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 STAT3P40763 770 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 TRDNQ13061 729 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 MAP2K5Q13163 448 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 BMP2KLQ5H9B9 411 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 MORN1Q5T089 497 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 FAM160B2Q86V87 743 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 TBC1D10CQ8IV04 446 aa27.3■■□□□ 1.96
CBX3-204ENST00000456948 SGSM2O43147 1006 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 NMT2O60551 498 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 ZKSCAN1P17029 563 aaPredicted RBP27.29■■□□□ 1.96
CBX3-204ENST00000456948 ERCC3P19447 782 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 STAT2P52630 851 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 TMEM132BQ14DG7 1078 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 KIFC2Q96AC6 838 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 APBA2Q99767 749 aa27.29■■□□□ 1.96
CBX3-204ENST00000456948 RBBP6Q7Z6E9 1792 aaKnown RBP27.29■■□□□ 1.96
CBX3-204ENST00000456948 MCCP23508 829 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 NOVP48745 357 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 RCSD1Q6JBY9 416 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 DPP9Q86TI2 863 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 DCAF4Q8WV16 495 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 TACC3Q9Y6A5 838 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 RLFQ13129 1914 aa27.28■■□□□ 1.96
CBX3-204ENST00000456948 TMEM232C9JQI7 657 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 GJB1P08034 283 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 FCER1AP12319 257 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 GRB14Q14449 540 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 MTFR1Q15390 333 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 RIOX2Q8IUF8 465 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 ABRAQ8N0Z2 381 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 USP6NLQ92738 828 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 TEX13BQ9BXU2 312 aa27.27■■□□□ 1.96
CBX3-204ENST00000456948 NBPF3Q9H094 633 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms