RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SDR42E1Q8WUS8 393 aa28.14■■■□□ 2.1
PTPRA-208ENST00000455631 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.13■■■□□ 2.09
PTPRA-208ENST00000455631 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.13■■■□□ 2.09
PTPRA-208ENST00000455631 SLC25A27O95847 323 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 CYP2D6P10635 497 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 ICA1Q05084 483 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 LENG1Q96BZ8 264 aaPredicted RBP28.13■■■□□ 2.09
PTPRA-208ENST00000455631 SH2D4AQ9H788 454 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 VCPKMTQ9H867 229 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 TTC28Q96AY4 2481 aa28.13■■■□□ 2.09
PTPRA-208ENST00000455631 TAL1P17542 331 aaPredicted RBP28.12■■■□□ 2.09
PTPRA-208ENST00000455631 ZKSCAN2Q63HK3 967 aa28.12■■■□□ 2.09
PTPRA-208ENST00000455631 AACSQ86V21 672 aa28.12■■■□□ 2.09
PTPRA-208ENST00000455631 TINF2Q9BSI4 451 aa28.12■■■□□ 2.09
PTPRA-208ENST00000455631 ZNF576Q9H609 170 aa28.12■■■□□ 2.09
PTPRA-208ENST00000455631 SWAP70Q9UH65 585 aa28.12■■■□□ 2.09
PTPRA-208ENST00000455631 TNFRSF10AO00220 468 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 WDR46O15213 610 aaKnown RBP28.11■■■□□ 2.09
PTPRA-208ENST00000455631 AKR1A1P14550 325 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 PDE6AP16499 860 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 KCTD2Q14681 263 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 SLC9C2Q5TAH2 1124 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 TIFAQ96CG3 184 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 DCP1AQ9NPI6 582 aaPredicted RBP28.11■■■□□ 2.09
PTPRA-208ENST00000455631 TMX2Q9Y320 296 aa28.11■■■□□ 2.09
PTPRA-208ENST00000455631 AKR1B1P15121 316 aa28.1■■■□□ 2.09
PTPRA-208ENST00000455631 COL9A1P20849 921 aa28.1■■■□□ 2.09
PTPRA-208ENST00000455631 FAAP100Q0VG06 881 aa28.1■■■□□ 2.09
PTPRA-208ENST00000455631 TTF1Q15361 905 aaPredicted RBP28.1■■■□□ 2.09
PTPRA-208ENST00000455631 DYNLL2Q96FJ2 89 aa28.1■■■□□ 2.09
PTPRA-208ENST00000455631 STARD7Q9NQZ5 370 aa28.1■■■□□ 2.09
PTPRA-208ENST00000455631 DCDC2CA8MYV0 355 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 ANKRD33Q7Z3H0 272 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 SIAH1Q8IUQ4 282 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 LCORLQ8N3X6 602 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 CNPY2Q9Y2B0 182 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 ZNF532Q9HCE3 1301 aa28.09■■■□□ 2.09
PTPRA-208ENST00000455631 ADAMTS4O75173 837 aa28.08■■■□□ 2.09
PTPRA-208ENST00000455631 ZNF865P0CJ78 1059 aaPredicted RBP28.08■■■□□ 2.09
PTPRA-208ENST00000455631 ZNF792Q3KQV3 632 aa28.08■■■□□ 2.09
PTPRA-208ENST00000455631 RIOX2Q8IUF8 465 aa28.08■■■□□ 2.09
PTPRA-208ENST00000455631 TOX2Q96NM4 488 aa28.08■■■□□ 2.09
PTPRA-208ENST00000455631 DIS3Q9Y2L1 958 aaKnown RBP28.08■■■□□ 2.09
PTPRA-208ENST00000455631 ACLYP53396 1101 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 ITPRIPQ8IWB1 547 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 NUP133Q8WUM0 1156 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 PPM1EQ8WY54 764 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 TSEN34Q9BSV6 310 aaKnown RBP28.07■■■□□ 2.08
PTPRA-208ENST00000455631 FBXO28Q9NVF7 368 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 EXOC6BQ9Y2D4 811 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 MUC3AQ02505 3323 aa28.07■■■□□ 2.08
PTPRA-208ENST00000455631 BAZ2AQ9UIF9 1905 aaKnown RBP28.06■■■□□ 2.08
PTPRA-208ENST00000455631 ERC1Q8IUD2 1116 aa28.06■■■□□ 2.08
PTPRA-208ENST00000455631 FTSJ3Q8IY81 847 aaKnown RBP28.06■■■□□ 2.08
PTPRA-208ENST00000455631 GAS2L1Q99501 681 aaPredicted RBP28.06■■■□□ 2.08
PTPRA-208ENST00000455631 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.06■■■□□ 2.08
PTPRA-208ENST00000455631 ADAMTS5Q9UNA0 930 aa28.06■■■□□ 2.08
PTPRA-208ENST00000455631 SYNRGQ9UMZ2 1314 aa28.06■■■□□ 2.08
PTPRA-208ENST00000455631 TIMP1P01033 207 aa28.05■■■□□ 2.08
PTPRA-208ENST00000455631 STAT3P40763 770 aa28.05■■■□□ 2.08
PTPRA-208ENST00000455631 CCDC129Q6ZRS4 1044 aa28.04■■■□□ 2.08
PTPRA-208ENST00000455631 DNAJC2Q99543 621 aaKnown RBP28.04■■■□□ 2.08
PTPRA-208ENST00000455631 ARMT1Q9H993 441 aa28.04■■■□□ 2.08
PTPRA-208ENST00000455631 TCRBV5S4A2TA0A5A2 114 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 MOXD2PA6NHM9 499 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 GOLIM4O00461 696 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 VWA5AO00534 786 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 RAD21O60216 631 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 COPB2P35606 906 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 CCDC17Q96LX7 622 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 IL1RAPL2Q9NP60 686 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 TBX21Q9UL17 535 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 ZNF214Q9UL59 606 aaPredicted RBP28.03■■■□□ 2.08
PTPRA-208ENST00000455631 PPP1R9AQ9ULJ8 1098 aa28.03■■■□□ 2.08
PTPRA-208ENST00000455631 EEF2P13639 858 aaKnown RBP28.02■■■□□ 2.08
PTPRA-208ENST00000455631 PBX2P40425 430 aa28.02■■■□□ 2.08
PTPRA-208ENST00000455631 KCNA10Q16322 511 aa28.02■■■□□ 2.08
PTPRA-208ENST00000455631 MFSD5Q6N075 450 aa28.02■■■□□ 2.08
PTPRA-208ENST00000455631 PBX4Q9BYU1 374 aa28.02■■■□□ 2.08
PTPRA-208ENST00000455631 ZHX1Q9UKY1 873 aaPredicted RBP28.02■■■□□ 2.08
PTPRA-208ENST00000455631 MROH7Q68CQ1 1323 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 PRKAB2O43741 272 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 PPIGQ13427 754 aaKnown RBP eCLIP28.01■■■□□ 2.07
PTPRA-208ENST00000455631 CEP85Q6P2H3 762 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 CCDC174Q6PII3 467 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 KLHDC9Q8NEP7 349 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 PRDM12Q9H4Q4 367 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 GOPCQ9HD26 462 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 THEGQ9P2T0 379 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 FAM184BQ9ULE4 1060 aa28.01■■■□□ 2.07
PTPRA-208ENST00000455631 CYP2D7A0A087X1C5 515 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 MYADML2A6NDP7 307 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 GRXCR1A8MXD5 290 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 SMIM22K7EJ46 135 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 CDK8P49336 464 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 FAM83BQ5T0W9 1011 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 AMOTL1Q8IY63 956 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 ATXN2LQ8WWM7 1075 aaKnown RBP28■■■□□ 2.07
PTPRA-208ENST00000455631 GLT1D1Q96MS3 346 aa28■■■□□ 2.07
PTPRA-208ENST00000455631 SYNGAP1Q96PV0 1343 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms