RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 FEZ1Q99689 392 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
TRAF4-206ENST00000454852 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
TRAF4-206ENST00000454852 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-206ENST00000454852 TRIM75PA6NK02 468 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 RASSF10A6NK89 507 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 BMP3P12645 472 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 VCAM1P19320 739 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-206ENST00000454852 SNAPC2Q13487 334 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 MOGSQ13724 837 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
TRAF4-206ENST00000454852 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
TRAF4-206ENST00000454852 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 SPZ1Q9BXG8 430 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
TRAF4-206ENST00000454852 PARP14Q460N5 1801 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 CDKL5O76039 1030 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 SLC10A3P09131 477 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 RXRAP19793 462 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
TRAF4-206ENST00000454852 GTF2A2P52657 109 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 HMGCS2P54868 508 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 CCT2P78371 535 aaKnown RBP13.09□□□□□ -0.31
TRAF4-206ENST00000454852 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
TRAF4-206ENST00000454852 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 MTMR8Q96EF0 704 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
TRAF4-206ENST00000454852 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
TRAF4-206ENST00000454852 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-206ENST00000454852 RLFQ13129 1914 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 FAM155AB1AL88 458 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 CETPP11597 493 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 STK3Q13188 491 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 SLC35G1Q2M3R5 365 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 RGS22Q8NE09 1264 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 NCOA5Q9HCD5 579 aaKnown RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-206ENST00000454852 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 CPLX1O14810 134 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 CYTH3O43739 400 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 FDX1P10109 184 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 STAT2P52630 851 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 INHBEP58166 350 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 CATSPERGQ6ZRH7 1159 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 RAB11FIP4Q86YS3 637 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 FAM177A1Q8N128 213 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
TRAF4-206ENST00000454852 ADAMTS5Q9UNA0 930 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
TRAF4-206ENST00000454852 A0A0G2JMZ2 1700 aa13.06□□□□□ -0.32
TRAF4-206ENST00000454852 MANSC4A6NHS7 340 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-206ENST00000454852 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms