RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 USP38Q8NB14 1042 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RHPN1Q8TCX5 695 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CHMP4CQ96CF2 233 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MAML3Q96JK9 1138 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CABP5Q9NP86 173 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GINM1Q9NU53 330 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PRKAG2Q9UGJ0 569 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 REV3LO60673 3130 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 NCOR1O75376 2440 aa7.26□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MYH4Q9Y623 1939 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SEPT4O43236 478 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ADCY6O43306 1168 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SLC4A3P48751 1232 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TLE2Q04725 743 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 FAM83BQ5T0W9 1011 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 OLFML2BQ68BL8 750 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SLC39A5Q6ZMH5 540 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TMEM179Q6ZVK1 233 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RASGRP2Q7LDG7 609 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RNPC3Q96LT9 517 aaKnown RBP7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 BOLA2Q9H3K6 86 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 XPNPEP3Q9NQH7 507 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SYNRGQ9UMZ2 1314 aa7.25□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GBF1Q92538 1859 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 A0A1W2PQ45 241 aaPredicted RBP7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 A0A1W2PQY0 241 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CCER2I3L3R5 266 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SMARCA5O60264 1052 aaPredicted RBP7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MSCO60682 206 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 EEF2P13639 858 aaKnown RBP7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 FOSL2P15408 326 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 DSG3P32926 999 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 COG2Q14746 738 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SNX17Q15036 470 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 REPS2Q8NFH8 660 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 FGD4Q96M96 766 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MMP19Q99542 508 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 VCPKMTQ9H867 229 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ARHGEF10LQ9HCE6 1279 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PAG1Q9NWQ8 432 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ZHX1Q9UKY1 873 aaPredicted RBP7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 XIRP2A4UGR9 3374 aa7.24□□□□□ -1.25
HLA-DPA3-207ENST00000454398 LCTP09848 1927 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ROBO3Q96MS0 1386 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 BDP1A6H8Y1 2624 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 USP17L21D6R901 530 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CLTBP09497 229 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 IFIT2P09913 472 aaKnown RBP7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RARBP10826 455 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 FCER1AP12319 257 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CAPN2P17655 700 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ADD2P35612 726 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PBX2P40425 430 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CDK8P49336 464 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CERS3Q8IU89 383 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ERC1Q8IUD2 1116 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 LRRC47Q8N1G4 583 aaKnown RBP7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ARRDC4Q8NCT1 418 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SHCBP1Q8NEM2 672 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 HOMER2Q9NSB8 354 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RAPGEFL1Q9UHV5 662 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ZNF214Q9UL59 606 aaPredicted RBP7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 COG6Q9Y2V7 657 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TMX2Q9Y320 296 aa7.23□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GRXCR1A8MXD5 290 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 VWA5AO00534 786 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 WDR46O15213 610 aaKnown RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ADAMTS4O75173 837 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PRDM1O75626 825 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RAG1P15918 1043 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 DNAJB2P25686 324 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 KCTD2Q14681 263 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 GRIN2CQ14957 1233 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 TTF1Q15361 905 aaPredicted RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SNRNP48Q6IEG0 339 aaKnown RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 CLASRPQ8N2M8 674 aaKnown RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MB21D1Q8N884 522 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PPM1EQ8WY54 764 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 VWCEQ96DN2 955 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PPP1R12CQ9BZL4 782 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PUS7LQ9H0K6 701 aaKnown RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 MROH8Q9H579 483 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 EPB41L4AQ9HCS5 686 aaPredicted RBP7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SWAP70Q9UH65 585 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 PPP1R9AQ9ULJ8 1098 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 RIPK3Q9Y572 518 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 SLC4A4Q9Y6R1 1079 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
HLA-DPA3-207ENST00000454398 NDUFB10O96000 172 aa7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 ZNF865P0CJ78 1059 aaPredicted RBP7.21□□□□□ -1.26
HLA-DPA3-207ENST00000454398 FPGSQ05932 587 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms