RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 FANCLQ9NW38 375 aa20.73■□□□□ 0.91
MECP2-205ENST00000453960 FLT1P17948 1338 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 USP17L3A6NCW0 530 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 USP17L4A6NCW7 530 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 TSPY3P0CV98 308 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 TSPY8P0CW00 308 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 UBASH3AP57075 661 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 FMR1Q06787 632 aaKnown RBP eCLIP20.72■□□□□ 0.912e-6■□□□□ 8.4
MECP2-205ENST00000453960 DPYDQ12882 1025 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 ZNF174Q15697 407 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 USP17L1Q7RTZ2 530 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 CCAR2Q8N163 923 aaKnown RBP20.72■□□□□ 0.91
MECP2-205ENST00000453960 DPF2Q92785 391 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 PAGE5Q96GU1 130 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 SPZ1Q9BXG8 430 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 TMX1Q9H3N1 280 aa20.72■□□□□ 0.91
MECP2-205ENST00000453960 MYH8P13535 1937 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 ADAMTS3O15072 1205 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 CYTH3O43739 400 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 CDK8P49336 464 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 MAPKAPK5Q8IW41 473 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 GSDMAQ96QA5 445 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
MECP2-205ENST00000453960 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 PAXBP1Q9Y5B6 917 aa20.71■□□□□ 0.91
MECP2-205ENST00000453960 GREB1LQ9C091 1923 aaPredicted RBP20.71■□□□□ 0.91
MECP2-205ENST00000453960 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
MECP2-205ENST00000453960 RIOK3O14730 519 aaKnown RBP20.7■□□□□ 0.9
MECP2-205ENST00000453960 TNNT1P13805 278 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 TBX2Q13207 712 aaPredicted RBP20.7■□□□□ 0.9
MECP2-205ENST00000453960 IL17AQ16552 155 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 TYW1BQ6NUM6 668 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 MTERF4Q7Z6M4 381 aaKnown RBP20.7■□□□□ 0.9
MECP2-205ENST00000453960 PROM2Q8N271 834 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 SLC44A5Q8NCS7 719 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 BARHL2Q9NY43 387 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 SFPQP23246 707 aaKnown RBP eCLIP20.7■□□□□ 0.9
MECP2-205ENST00000453960 MFSD14BQ5SR56 506 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 TEX11Q8IYF3 940 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 GRAMD1CQ8IYS0 662 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 PDILTQ8N807 584 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 CCDC148Q8NFR7 591 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 PDCL3Q9H2J4 239 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 ATP6V0A2Q9Y487 856 aa20.7■□□□□ 0.9
MECP2-205ENST00000453960 COL11A2P13942 1736 aaPredicted RBP20.69■□□□□ 0.9
MECP2-205ENST00000453960 USP27XA6NNY8 438 aa20.69■□□□□ 0.9
MECP2-205ENST00000453960 CUL4BQ13620 913 aa20.69■□□□□ 0.9
MECP2-205ENST00000453960 TPD52L1Q16890 204 aaPredicted RBP20.69■□□□□ 0.9
MECP2-205ENST00000453960 PDXDC2PQ6P474 469 aa20.69■□□□□ 0.9
MECP2-205ENST00000453960 DHX58Q96C10 678 aa20.69■□□□□ 0.9
MECP2-205ENST00000453960 C16orf45Q96MC5 204 aaPredicted RBP20.69■□□□□ 0.9
MECP2-205ENST00000453960 STXBP3O00186 592 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 LONP1P36776 959 aaKnown RBP20.68■□□□□ 0.9
MECP2-205ENST00000453960 SYCP1Q15431 976 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 E4F1Q66K89 784 aaPredicted RBP20.68■□□□□ 0.9
MECP2-205ENST00000453960 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 CCDC112Q8NEF3 446 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 EYA3Q99504 573 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 COA1Q9GZY4 146 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 NFE2L3Q9Y4A8 694 aa20.68■□□□□ 0.9
MECP2-205ENST00000453960 KIF2AO00139 706 aaPredicted RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 SERPINC1P01008 464 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 GABPAQ06546 454 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 HSP90AA2PQ14568 343 aaPredicted RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 WWC2Q6AWC2 1192 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 EP400Q96L91 3159 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 VWA3AA6NCI4 1184 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 TXNRD1Q16881 649 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 APTXQ7Z2E3 356 aaKnown RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 IQUBQ8NA54 791 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 ZMYND12Q9H0C1 365 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 SAP30BPQ9UHR5 308 aaKnown RBP20.67■□□□□ 0.9
MECP2-205ENST00000453960 PCDHA6Q9UN73 950 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 DAGLAQ9Y4D2 1042 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 PCDHA8Q9Y5H6 950 aa20.67■□□□□ 0.9
MECP2-205ENST00000453960 MYO3BQ8WXR4 1341 aa20.66■□□□□ 0.9
MECP2-205ENST00000453960 TUBB4AP04350 444 aa20.66■□□□□ 0.9
MECP2-205ENST00000453960 TOP1P11387 765 aaKnown RBP20.66■□□□□ 0.9
MECP2-205ENST00000453960 SLC4A8Q2Y0W8 1093 aa20.66■□□□□ 0.9
MECP2-205ENST00000453960 GPKOWQ92917 476 aaPredicted RBP eCLIP20.66■□□□□ 0.9
MECP2-205ENST00000453960 PPP1R3GB7ZBB8 358 aa20.65■□□□□ 0.9
MECP2-205ENST00000453960 LAD1O00515 517 aa20.65■□□□□ 0.9
MECP2-205ENST00000453960 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
MECP2-205ENST00000453960 CFAP100Q494V2 611 aa20.65■□□□□ 0.9
MECP2-205ENST00000453960 IGKV6D-41A0A0C4DH26 115 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 A0A1B0GTH6 734 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 GTPBP6O43824 516 aaPredicted RBP20.64■□□□□ 0.9
MECP2-205ENST00000453960 PRPHP41219 470 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 SEMA3FQ13275 785 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 NR1I3Q14994 352 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 PTPN14Q15678 1187 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 CDKAL1Q5VV42 579 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 SPATA1Q5VX52 437 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 CEP135Q66GS9 1140 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 FCHSD1Q86WN1 690 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 ZNF710Q8N1W2 664 aa20.64■□□□□ 0.9
MECP2-205ENST00000453960 MTRQ99707 1265 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms