RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 KANSL2Q9H9L4 492 aa10.3□□□□□ -0.76
COL28A1-205ENST00000453441 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
COL28A1-205ENST00000453441 FZD1Q9UP38 647 aa10.3□□□□□ -0.76
COL28A1-205ENST00000453441 RBM8AQ9Y5S9 174 aaKnown RBP10.3□□□□□ -0.76
COL28A1-205ENST00000453441 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
COL28A1-205ENST00000453441 C19orf81C9J6K1 198 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 MPHOSPH10O00566 681 aaKnown RBP10.29□□□□□ -0.76
COL28A1-205ENST00000453441 ALDH1A1P00352 501 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 GH2P01242 217 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 MCCP23508 829 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 VEGFBP49765 207 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 USP14P54578 494 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
COL28A1-205ENST00000453441 PTH1RQ03431 593 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 FASTKD5Q7L8L6 764 aaKnown RBP10.29□□□□□ -0.76
COL28A1-205ENST00000453441 SLC44A5Q8NCS7 719 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 ARHGEF10LQ9HCE6 1279 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 AFG3L2Q9Y4W6 797 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 ZHX2Q9Y6X8 837 aa10.29□□□□□ -0.76
COL28A1-205ENST00000453441 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 IRF6O14896 467 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 CA12O43570 354 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 GDF11O95390 407 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 AKR1B1P15121 316 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 ZKSCAN1P17029 563 aaPredicted RBP10.28□□□□□ -0.76
COL28A1-205ENST00000453441 TM4SF4P48230 202 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 PABPC4Q13310 644 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL28A1-205ENST00000453441 KRT32Q14532 448 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 RRP1BQ14684 758 aaKnown RBP10.28□□□□□ -0.76
COL28A1-205ENST00000453441 RAB3GAP1Q15042 981 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 DNAJC5GQ8N7S2 189 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 TCP11L1Q9NUJ3 509 aa10.28□□□□□ -0.76
COL28A1-205ENST00000453441 PTPRFP10586 1907 aa10.27□□□□□ -0.76
COL28A1-205ENST00000453441 A0A0G2JLL6 359 aaPredicted RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TSPY2A6NKD2 308 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 RANBP6O60518 1105 aaKnown RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 CYP21A2P08686 494 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 SLURP2P0DP57 97 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 BACE1P56817 501 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 HAND2P61296 217 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 HTRA3P83110 453 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TFAP4Q01664 338 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 KIF23Q02241 960 aaPredicted RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 ICA1Q05084 483 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 SPP2Q13103 211 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 SEPT2Q15019 361 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 NECTIN1Q15223 517 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 PRRT2Q7Z6L0 340 aaPredicted RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 IQCA1Q86XH1 822 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TBC1D10CQ8IV04 446 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 JMYQ8N9B5 988 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
COL28A1-205ENST00000453441 NCOA7Q8NI08 942 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 C12orf42Q96LP6 360 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TTC14Q96N46 770 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 FEZ1Q99689 392 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TOMM22Q9NS69 142 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 TMOD4Q9NZQ9 345 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 NYAP2Q9P242 653 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 SLC45A1Q9Y2W3 748 aa10.27□□□□□ -0.77
COL28A1-205ENST00000453441 CCL15-CCL14A0A0B4J2E2 113 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 IGKV6D-41A0A0C4DH26 115 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 SLC27A2O14975 620 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 PRDM1O75626 825 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 TTLL1O95922 423 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
COL28A1-205ENST00000453441 GUCY1A2P33402 732 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 HSPA4P34932 840 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 GJA5P36382 358 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 GRM1Q13255 1194 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
COL28A1-205ENST00000453441 CCL15Q16663 113 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 CREB3L3Q68CJ9 461 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 ANKRD23Q86SG2 305 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 LPAR1Q92633 364 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 SAGE1Q9NXZ1 904 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 TMX2Q9Y320 296 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 LOC285556D6RIA3 1793 aa10.26□□□□□ -0.77
COL28A1-205ENST00000453441 TRIM75PA6NK02 468 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 E7EWF7 191 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 SMIM22K7EJ46 135 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 RNF40O75150 1001 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 NOVP48745 357 aa10.25□□□□□ -0.77
COL28A1-205ENST00000453441 JAG1P78504 1218 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms