RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-203ENST00000452013 TMEM47Q9BQJ4 181 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 SRRDQ9UH36 339 aa10.44□□□□□ -0.74
COL8A1-203ENST00000452013 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
COL8A1-203ENST00000452013 SLC27A2O14975 620 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 PLA2G6O60733 806 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-203ENST00000452013 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-203ENST00000452013 MCCP23508 829 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
COL8A1-203ENST00000452013 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 NBPF11Q86T75 865 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 FAM160B2Q86V87 743 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 DCAF4Q8WV16 495 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 NUP88Q99567 741 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-203ENST00000452013 SLF1Q9BQI6 1058 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 ZKSCAN3Q9BRR0 538 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 ARHGAP39Q9C0H5 1083 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 KAT14Q9H8E8 782 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 TXNRD2Q9NNW7 524 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 OTOFQ9HC10 1997 aa10.43□□□□□ -0.74
COL8A1-203ENST00000452013 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 FOCADQ5VW36 1801 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 DDX60LQ5H9U9 1706 aaKnown RBP10.42□□□□□ -0.74
COL8A1-203ENST00000452013 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
COL8A1-203ENST00000452013 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
COL8A1-203ENST00000452013 CNMDO75829 334 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 SLC25A27O95847 323 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-203ENST00000452013 KRT32Q14532 448 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 RAET1EQ8TD07 263 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 ATG4CQ96DT6 458 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 ABHD8Q96I13 439 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 FBXO28Q9NVF7 368 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 BTBD7Q9P203 1132 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 MTMR7Q9Y216 660 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 MYH1P12882 1939 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 DOCK1Q14185 1865 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
COL8A1-203ENST00000452013 TNKSO95271 1327 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 VWA5AO00534 786 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 STRNO43815 780 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 CTGFP29279 349 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 MCM5P33992 734 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 COPB2P35606 906 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 STAT3P40763 770 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 STAT2P52630 851 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 PLS1Q14651 629 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 TSGA10IPQ3SY00 556 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
COL8A1-203ENST00000452013 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 MROH8Q9H579 483 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
COL8A1-203ENST00000452013 PEX10O60683 326 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
COL8A1-203ENST00000452013 FLT3LGP49771 235 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 CAP1Q01518 475 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 PRKCZQ05513 592 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 IRF5Q13568 498 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 TMEM132BQ14DG7 1078 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 WTAPQ15007 396 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
COL8A1-203ENST00000452013 KCTD1Q719H9 257 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 GPR142Q7Z601 462 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 ENAHQ8N8S7 591 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-203ENST00000452013 PNMA1Q8ND90 353 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 NKX2-3Q8TAU0 364 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 SOCS4Q8WXH5 440 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 CHMP4CQ96CF2 233 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 NEK1Q96PY6 1258 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
COL8A1-203ENST00000452013 PORCNQ9H237 461 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 GJD2Q9UKL4 321 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 PTCH2Q9Y6C5 1203 aa10.4□□□□□ -0.74
COL8A1-203ENST00000452013 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 CCDC85CA6NKD9 419 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 ATP2A1O14983 1001 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 PDHBP11177 359 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 ERCC3P19447 782 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 PTPREP23469 700 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 OAZ1P54368 228 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
COL8A1-203ENST00000452013 SEC23AQ15436 765 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms