RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 FIBPO43427 364 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 VEGFAP15692 232 aaPredicted RBP12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 MYSM1Q5VVJ2 828 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 SLFN13Q68D06 897 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
NDUFA3-209ENST00000451517 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 F5H6K3 240 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 NDUFB10O96000 172 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 ASNSP08243 561 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 KLRC3Q07444 240 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 NPY5RQ15761 445 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 KLHL40Q2TBA0 621 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 DCAF15Q66K64 600 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 ZNF341Q9BYN7 854 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 CPVLQ9H3G5 476 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 ZNF112Q9UJU3 913 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
NDUFA3-209ENST00000451517 MYH4Q9Y623 1939 aa12.96□□□□□ -0.34
NDUFA3-209ENST00000451517 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 MBD3O95983 291 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 KRT2P35908 639 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 UBE2HP62256 183 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 ACER1Q8TDN7 264 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 MTMR8Q96EF0 704 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 RTEL1Q9NZ71 1219 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 RCOR1Q9UKL0 485 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
NDUFA3-209ENST00000451517 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 MYH6P13533 1939 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 STXBP3O00186 592 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 CALML3P27482 149 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 ECE1P42892 770 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 SLC1A4P43007 532 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 OXER1Q8TDS5 423 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 PIGSQ96S52 555 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
NDUFA3-209ENST00000451517 YEATS4O95619 227 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 BMP3P12645 472 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 EPHX2P34913 555 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 NLRP5P59047 1200 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 NR5A1Q13285 461 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 SUPT20HL1Q3ZLR7 823 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 HEATR3Q7Z4Q2 680 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 DAGLBQ8NCG7 672 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 CCDC148Q8NFR7 591 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 DCPSQ96C86 337 aaKnown RBP12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 FTOQ9C0B1 505 aaKnown RBP eCLIP12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 VCPKMTQ9H867 229 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 VAT1LQ9HCJ6 419 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
NDUFA3-209ENST00000451517 PNMA6FA0A0J9YX94 578 aa12.92□□□□□ -0.34
NDUFA3-209ENST00000451517 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
NDUFA3-209ENST00000451517 INPP5BP32019 993 aa12.92□□□□□ -0.34
NDUFA3-209ENST00000451517 SLC16A2P36021 539 aa12.92□□□□□ -0.34
NDUFA3-209ENST00000451517 KIAA1755Q5JYT7 1200 aa12.92□□□□□ -0.34
NDUFA3-209ENST00000451517 PRAMEF18Q5VWM3 479 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms