RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 GUCD1Q96NT3 240 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 SWAP70Q9UH65 585 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 C7P10643 843 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 GABPAQ06546 454 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 RHPN1Q8TCX5 695 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 SLC39A7Q92504 469 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 MMP19Q99542 508 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 COL25A1Q9BXS0 654 aaPredicted RBP11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 XPNPEP3Q9NQH7 507 aa11.65□□□□□ -0.54
SPTLC3-204ENST00000450297 PRKAB2O43741 272 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 MBD4O95243 580 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 RARBP10826 455 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 AKR1B1P15121 316 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 TLE2Q04725 743 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 KCTD2Q14681 263 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 LRRC41Q15345 812 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 FAM47AQ5JRC9 791 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 CDX2Q99626 313 aaPredicted RBP11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 METRNQ9UJH8 293 aa11.64□□□□□ -0.55
SPTLC3-204ENST00000450297 HMMRO75330 724 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 SLC25A27O95847 323 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 PGK1P00558 417 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 PGK2P07205 417 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 RNF180Q86T96 592 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 BOLA2Q9H3K6 86 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 VCPKMTQ9H867 229 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 TMX2Q9Y320 296 aa11.63□□□□□ -0.55
SPTLC3-204ENST00000450297 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 USP17L21D6R901 530 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 PYGBP11216 843 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 STAT3P40763 770 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 CDK8P49336 464 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 MAFAQ8NHW3 353 aaPredicted RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 RNPC3Q96LT9 517 aaKnown RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 SEMA6BQ9H3T3 888 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 PDLIM7Q9NR12 457 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 CNPY2Q9Y2B0 182 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 TACC3Q9Y6A5 838 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
SPTLC3-204ENST00000450297 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 TTLL13PA6NNM8 815 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 IGHA2P01877 340 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 CLTBP09497 229 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 FOSL2P15408 326 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 RAG1P15918 1043 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 SIAH1Q8IUQ4 282 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 TINF2Q9BSI4 451 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 TMEM39AQ9NV64 488 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 FBXO28Q9NVF7 368 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 PHF24Q9UPV7 400 aa11.61□□□□□ -0.55
SPTLC3-204ENST00000450297 MS4A1P11836 297 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 TAL1P17542 331 aaPredicted RBP11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 ADD2P35612 726 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 SMAD3P84022 425 aaKnown RBP11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 GSE1Q14687 1217 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 SNX17Q15036 470 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 C12orf60Q5U649 245 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 LAMA3Q16787 3333 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 MYH1P12882 1939 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
SPTLC3-204ENST00000450297 A0A1W2PQ45 241 aaPredicted RBP11.59□□□□□ -0.55
SPTLC3-204ENST00000450297 A0A1W2PQY0 241 aa11.59□□□□□ -0.55
SPTLC3-204ENST00000450297 DCDC2CA8MYV0 355 aa11.59□□□□□ -0.55
SPTLC3-204ENST00000450297 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
SPTLC3-204ENST00000450297 VWA5AO00534 786 aa11.59□□□□□ -0.55
SPTLC3-204ENST00000450297 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms