RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 GDPD2Q9HCC8 539 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 SH3GLB2Q9NR46 395 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
RFC4-210ENST00000449502 KCNJ14Q9UNX9 436 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 LAMB1P07942 1786 aa11.16□□□□□ -0.62
RFC4-210ENST00000449502 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 SNHG28P0DPA3 235 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 BMP3P12645 472 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 EPHX2P34913 555 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 GALNT17Q6IS24 598 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 KCTD1Q719H9 257 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 CDAN1Q8IWY9 1227 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 TEPSINQ96N21 525 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 GJB4Q9NTQ9 266 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 LMBRD1Q9NUN5 540 aa11.15□□□□□ -0.62
RFC4-210ENST00000449502 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
RFC4-210ENST00000449502 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 NDUFB10O96000 172 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 HIRAP54198 1017 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 NAPAP54920 295 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 UBE2HP62256 183 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 STK38Q15208 465 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 PKN1Q16512 942 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 SHROOM1Q2M3G4 852 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 TMEM87AQ8NBN3 555 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
RFC4-210ENST00000449502 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 WRNIP1Q96S55 665 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 PGAP2Q9UHJ9 254 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 TMX2Q9Y320 296 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
RFC4-210ENST00000449502 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
RFC4-210ENST00000449502 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 BTBD18B2RXH4 712 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 GNA11P29992 359 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 SLC16A2P36021 539 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 TRAF1Q13077 416 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 PRAMEF18Q5VWM3 479 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
RFC4-210ENST00000449502 SCYL3Q8IZE3 742 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 ADGRF4Q8IZF3 695 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 BICD2Q8TD16 824 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 CHURC1Q8WUH1 139 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 LEO1Q8WVC0 666 aaPredicted RBP11.13□□□□□ -0.63
RFC4-210ENST00000449502 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
RFC4-210ENST00000449502 PIGSQ96S52 555 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 PHF20Q9BVI0 1012 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 BARHL2Q9NY43 387 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 CEP131Q9UPN4 1083 aa11.13□□□□□ -0.63
RFC4-210ENST00000449502 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 ZBTB5O15062 677 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 CYTH3O43739 400 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.634e-7■■□□□ 12.4
RFC4-210ENST00000449502 ECE1P42892 770 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 ME1P48163 572 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
RFC4-210ENST00000449502 USP14P54578 494 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 JAG1P78504 1218 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 TTLL12Q14166 644 aaPredicted RBP11.12□□□□□ -0.63
RFC4-210ENST00000449502 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
RFC4-210ENST00000449502 KLHL40Q2TBA0 621 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 SYDE2Q5VT97 1194 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 WWC2Q6AWC2 1192 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
RFC4-210ENST00000449502 ACER1Q8TDN7 264 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms