RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SMCR8Q8TEV9 937 aaPredicted RBP13.58□□□□□ -0.24
LINC00408-201ENST00000447784 MKL1Q969V6 931 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
LINC00408-201ENST00000447784 MYH7P12883 1935 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
LINC00408-201ENST00000447784 CCDC69A6NI79 296 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 HOXD10P28358 340 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
LINC00408-201ENST00000447784 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
LINC00408-201ENST00000447784 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
LINC00408-201ENST00000447784 ANKS1AQ92625 1134 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 C12orf42Q96LP6 360 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 TBC1D32Q96NH3 1257 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 TMEM47Q9BQJ4 181 aa13.57□□□□□ -0.24
LINC00408-201ENST00000447784 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
LINC00408-201ENST00000447784 A0A1W2PRG0 241 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 F5H6K3 240 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 CPA1P15085 419 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 PSMC4P43686 418 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 ANTXR2P58335 489 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
LINC00408-201ENST00000447784 KLRC3Q07444 240 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 FAM110CQ1W6H9 321 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 NKX2-3Q8TAU0 364 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 LPAR1Q92633 364 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 TCEANC2Q96MN5 208 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 LRRC2Q9BYS8 371 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 ARHGAP39Q9C0H5 1083 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
LINC00408-201ENST00000447784 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
LINC00408-201ENST00000447784 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 NAV1Q8NEY1 1877 aa13.56□□□□□ -0.24
LINC00408-201ENST00000447784 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
LINC00408-201ENST00000447784 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
LINC00408-201ENST00000447784 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
LINC00408-201ENST00000447784 CTGFP29279 349 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 SLC1A4P43007 532 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 NOVP48745 357 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 NEK4P51957 841 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 FCGRTP55899 365 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 RABEP1Q15276 862 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 Q6ZUG5 572 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 SPICE1Q8N0Z3 855 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 PNMA1Q8ND90 353 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 GMCL1P1Q8NEA9 526 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 IGDCC4Q8TDY8 1250 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 CDK5RAP2Q96SN8 1893 aa13.55□□□□□ -0.24
LINC00408-201ENST00000447784 NDUFB10O96000 172 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 LIFRP42702 1097 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
LINC00408-201ENST00000447784 SEC23AQ15436 765 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 CCDC96Q2M329 555 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 NBPF11Q86T75 865 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 GTF3C2Q8WUA4 911 aaPredicted RBP13.54□□□□□ -0.24
LINC00408-201ENST00000447784 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 LY9Q9HBG7 655 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
LINC00408-201ENST00000447784 WDR46O15213 610 aaKnown RBP13.53□□□□□ -0.24
LINC00408-201ENST00000447784 ST18O60284 1047 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 CALM1P0DP23 149 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 CALM2P0DP24 149 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 CALM3P0DP25 149 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 VCAM1P19320 739 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 IKQ13123 557 aaPredicted RBP13.53□□□□□ -0.24
LINC00408-201ENST00000447784 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 BRF1Q92994 677 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 TANGO6Q9C0B7 1094 aa13.53□□□□□ -0.24
LINC00408-201ENST00000447784 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
LINC00408-201ENST00000447784 KLF18A0A0U1RQI7 1052 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 DDAH1O94760 285 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 BMP3P12645 472 aa13.52□□□□□ -0.25
LINC00408-201ENST00000447784 KIF5BP33176 963 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms