RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 VPS54Q9P1Q0 977 aa17.96■□□□□ 0.46
CNOT3-204ENST00000447684 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.46
CNOT3-204ENST00000447684 FSBPO95073 299 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 SEC24CP53992 1094 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 NNTQ13423 1086 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 RCCD1A6NED2 376 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 FAM205CA6NFA0 338 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 IFIT3O14879 490 aaKnown RBP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 NEBLO76041 1014 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 CXCR5P32302 372 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 TRIM14Q14142 442 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC40Q4G0X9 1142 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 SLC24A3Q9HC58 644 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 FAM217BQ9NTX9 383 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
CNOT3-204ENST00000447684 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.95■□□□□ 0.46
CNOT3-204ENST00000447684 SEMA3EO15041 775 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 FOXO4P98177 505 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
CNOT3-204ENST00000447684 NAA35Q5VZE5 725 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 GPIHBP1Q8IV16 184 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 DHX37Q8IY37 1157 aaKnown RBP17.94■□□□□ 0.46
CNOT3-204ENST00000447684 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 SMCR8Q8TEV9 937 aaPredicted RBP17.94■□□□□ 0.46
CNOT3-204ENST00000447684 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
CNOT3-204ENST00000447684 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 CEP126Q9P2H0 1117 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 EEF2KMTQ96G04 330 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
CNOT3-204ENST00000447684 LIMA1Q9UHB6 759 aaKnown RBP17.94■□□□□ 0.46
CNOT3-204ENST00000447684 EYA2O00167 538 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-204ENST00000447684 LSP1P33241 339 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 KRT83P78385 493 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 DDR1Q08345 913 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 IQCA1Q86XH1 822 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 NELFBQ8WX92 580 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC114Q96M63 670 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 PCMTD1Q96MG8 357 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-204ENST00000447684 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 EHD2Q9NZN4 543 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 MCM8Q9UJA3 840 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 TMEM94Q12767 1356 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 NAP1L1P55209 391 aaKnown RBP17.93■□□□□ 0.46
CNOT3-204ENST00000447684 PAK1Q13153 545 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC181Q5TID7 509 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 LRCH2Q5VUJ6 765 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC13Q8IYE1 715 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 KIRREL3Q8IZU9 778 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
CNOT3-204ENST00000447684 WASF1Q92558 559 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 MIEF2Q96C03 454 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 ZNF496Q96IT1 587 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-204ENST00000447684 ZIM3Q96PE6 472 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 GSDMAQ96QA5 445 aa17.93■□□□□ 0.46
CNOT3-204ENST00000447684 ATP2C2O75185 946 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 SATB1Q01826 763 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 E2F5Q15329 346 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 FMNL1O95466 1100 aaPredicted RBP17.92■□□□□ 0.46
CNOT3-204ENST00000447684 KCNA6P17658 529 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 PAX7P23759 505 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 HDLBPQ00341 1268 aaKnown RBP17.92■□□□□ 0.46
CNOT3-204ENST00000447684 SPAG1Q07617 926 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 ZNF473Q8WTR7 871 aaKnown RBP17.92■□□□□ 0.46
CNOT3-204ENST00000447684 XAGE2Q96GT9 111 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 LY9Q9HBG7 655 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC96Q2M329 555 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 STAG1Q8WVM7 1258 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 TRIM75PA6NK02 468 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 E7EVH7 732 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 PDHBP11177 359 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 HPDP32754 393 aaPredicted RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 CYLC1P35663 651 aaPredicted RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 EPHB4P54760 987 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 SKOR1P84550 965 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 SLC40A1Q9NP59 571 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 PPANQ9NQ55 473 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 ZNHIT6Q9NWK9 470 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 TRIM49BA6NDI0 452 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 TRIM21P19474 475 aaKnown RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 DNA2P51530 1060 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 KIF5AQ12840 1032 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 PREPLQ4J6C6 727 aaPredicted RBP17.91■□□□□ 0.46
CNOT3-204ENST00000447684 WDR59Q6PJI9 974 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 EPN3Q9H201 632 aa17.91■□□□□ 0.46
CNOT3-204ENST00000447684 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms