RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 NDUFB10O96000 172 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
SF3A1-204ENST00000447376 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 PLEKHH3Q7Z736 793 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 ARMC5Q96C12 935 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 SLF1Q9BQI6 1058 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 LAMA4Q16363 1823 aa19.3■□□□□ 0.68
SF3A1-204ENST00000447376 ADCY3O60266 1144 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 BMP3P12645 472 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 SLC1A4P43007 532 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 IRF5Q13568 498 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 TBC1D10CQ8IV04 446 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 PRPF38AQ8NAV1 312 aaKnown RBP19.29■□□□□ 0.68
SF3A1-204ENST00000447376 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 TCP11L1Q9NUJ3 509 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 FEM1BQ9UK73 627 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 PPP1R9AQ9ULJ8 1098 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 GABRQQ9UN88 632 aa19.29■□□□□ 0.68
SF3A1-204ENST00000447376 COPB2P35606 906 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 Q3C1V9 767 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 GPR142Q7Z601 462 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 PXYLP1Q8TE99 480 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 CHURC1Q8WUH1 139 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 TTC14Q96N46 770 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 SPATC1LQ9H0A9 340 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 BTBD7Q9P203 1132 aa19.28■□□□□ 0.68
SF3A1-204ENST00000447376 NMT2O60551 498 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 ZBED4O75132 1171 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 KDM4AO75164 1064 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 CNMDO75829 334 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 TOP1P11387 765 aaKnown RBP19.27■□□□□ 0.68
SF3A1-204ENST00000447376 RGS2P41220 211 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 STAT2P52630 851 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 SOX10P56693 466 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 TRMT44Q8IYL2 757 aaKnown RBP19.27■□□□□ 0.68
SF3A1-204ENST00000447376 GMCL1Q96IK5 515 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 ZNF333Q96JL9 665 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.68
SF3A1-204ENST00000447376 PORCNQ9H237 461 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 IL17RBQ9NRM6 502 aa19.27■□□□□ 0.68
SF3A1-204ENST00000447376 NEDD4P46934 1319 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 PEX10O60683 326 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 SLC25A27O95847 323 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 FDX1P10109 184 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 CCDC96Q2M329 555 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
SF3A1-204ENST00000447376 FAM160B2Q86V87 743 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 SHCBP1Q8NEM2 672 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 KIFC2Q96AC6 838 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 ESYT1Q9BSJ8 1104 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 UBAC1Q9BSL1 405 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 IL25Q9H293 177 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 MROH8Q9H579 483 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 FBXO28Q9NVF7 368 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 SLC5A4Q9NY91 659 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 MTMR7Q9Y216 660 aa19.26■□□□□ 0.67
SF3A1-204ENST00000447376 SLC15A5A6NIM6 579 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 VWA5AO00534 786 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 STRNO43815 780 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 MCCP23508 829 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 NCAPG2Q86XI2 1143 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 DGKHQ86XP1 1220 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 DCAF4Q8WV16 495 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 MOV10L1Q9BXT6 1211 aaKnown RBP19.25■□□□□ 0.67
SF3A1-204ENST00000447376 ANO2Q9NQ90 1003 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 TACC3Q9Y6A5 838 aa19.25■□□□□ 0.67
SF3A1-204ENST00000447376 ERICH2A1L162 156 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 B4E1Z4 1266 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 MYCP01106 439 aaPredicted RBP19.24■□□□□ 0.67
SF3A1-204ENST00000447376 CYP2B6P20813 491 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 PTH1RQ03431 593 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 RCSD1Q6JBY9 416 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 APBA2Q99767 749 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 TMEM47Q9BQJ4 181 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 KAT14Q9H8E8 782 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 A0A0G2JMZ2 1700 aa19.24■□□□□ 0.67
SF3A1-204ENST00000447376 HMGCRP04035 888 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 XRCC5P13010 732 aaKnown RBP19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ELNP15502 786 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ZKSCAN1P17029 563 aaPredicted RBP19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ERCC3P19447 782 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 STAT3P40763 770 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 SART3Q15020 963 aaKnown RBP19.23■□□□□ 0.67
SF3A1-204ENST00000447376 MAP4K1Q92918 833 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ZSCAN10Q96SZ4 725 aaPredicted RBP19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ZKSCAN3Q9BRR0 538 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 GJD2Q9UKL4 321 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 ADAMTS5Q9UNA0 930 aa19.23■□□□□ 0.67
SF3A1-204ENST00000447376 FCER1AP12319 257 aa19.22■□□□□ 0.67
SF3A1-204ENST00000447376 PTPREP23469 700 aa19.22■□□□□ 0.67
SF3A1-204ENST00000447376 NOVP48745 357 aa19.22■□□□□ 0.67
SF3A1-204ENST00000447376 MAP2K5Q13163 448 aa19.22■□□□□ 0.67
SF3A1-204ENST00000447376 TMEM132BQ14DG7 1078 aa19.22■□□□□ 0.67
SF3A1-204ENST00000447376 RNF20Q5VTR2 975 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms