RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 ANKRD13CQ8N6S4 541 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 DCAF4Q8WV16 495 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 ZKSCAN3Q9BRR0 538 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 RBPJLQ9UBG7 517 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 ADAMTS5Q9UNA0 930 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 GTF3C3Q9Y5Q9 886 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 TNKSO95271 1327 aa25.83■■□□□ 1.73
APOE-204ENST00000446996 RAD21O60216 631 aa25.82■■□□□ 1.72
APOE-204ENST00000446996 SART3Q15020 963 aaKnown RBP25.82■■□□□ 1.72
APOE-204ENST00000446996 SEC23AQ15436 765 aa25.82■■□□□ 1.72
APOE-204ENST00000446996 CTU1Q7Z7A3 348 aaKnown RBP25.82■■□□□ 1.72
APOE-204ENST00000446996 ENAHQ8N8S7 591 aaPredicted RBP25.82■■□□□ 1.72
APOE-204ENST00000446996 GPRC5AQ8NFJ5 357 aa25.82■■□□□ 1.72
APOE-204ENST00000446996 FEM1BQ9UK73 627 aa25.82■■□□□ 1.72
APOE-204ENST00000446996 MGAMO43451 1857 aa25.81■■□□□ 1.72
APOE-204ENST00000446996 SLC1A4P43007 532 aa25.81■■□□□ 1.72
APOE-204ENST00000446996 PKN2Q16513 984 aaKnown RBP25.81■■□□□ 1.72
APOE-204ENST00000446996 CD99L2Q8TCZ2 262 aa25.81■■□□□ 1.72
APOE-204ENST00000446996 USP26Q9BXU7 913 aa25.81■■□□□ 1.72
APOE-204ENST00000446996 PPP1R9AQ9ULJ8 1098 aa25.81■■□□□ 1.72
APOE-204ENST00000446996 ERICH2A1L162 156 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 FDX1P10109 184 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 MCM5P33992 734 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 POTEEQ6S8J3 1075 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 FAM160B2Q86V87 743 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 PRPF38AQ8NAV1 312 aaKnown RBP25.8■■□□□ 1.72
APOE-204ENST00000446996 CHURC1Q8WUH1 139 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 KAT14Q9H8E8 782 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 A0A0G2JMZ2 1700 aa25.8■■□□□ 1.72
APOE-204ENST00000446996 SNHG28P0DPA3 235 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 MCCP23508 829 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 PRMT2P55345 433 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 ERVK-9P63128 1117 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 ERVK-24P63145 666 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 IFIT1BQ5T764 474 aaKnown RBP25.79■■□□□ 1.72
APOE-204ENST00000446996 RASEFQ8IZ41 740 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 NEK1Q96PY6 1258 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 SLF1Q9BQI6 1058 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 EFCC1Q9HA90 598 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 TXNRD2Q9NNW7 524 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 WDR19Q8NEZ3 1342 aa25.79■■□□□ 1.72
APOE-204ENST00000446996 IFIT3O14879 490 aaKnown RBP25.78■■□□□ 1.72
APOE-204ENST00000446996 CNMDO75829 334 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 HMGB1P09429 215 aaKnown RBP25.78■■□□□ 1.72
APOE-204ENST00000446996 HOXD10P28358 340 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 FCGRTP55899 365 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 CCNA1P78396 465 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 PNMA1Q8ND90 353 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 TMEM87BQ96K49 555 aa25.78■■□□□ 1.72
APOE-204ENST00000446996 NUP88Q99567 741 aaPredicted RBP25.78■■□□□ 1.72
APOE-204ENST00000446996 PSMC4P43686 418 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 ANTXR2P58335 489 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 Q3C1V9 767 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 OTOP1Q7RTM1 612 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 TMTC2Q8N394 836 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 IGDCC4Q8TDY8 1250 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 ATG4CQ96DT6 458 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 FBXO28Q9NVF7 368 aa25.77■■□□□ 1.72
APOE-204ENST00000446996 TMEM232C9JQI7 657 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 PDHBP11177 359 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 STAT2P52630 851 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 WTAPQ15007 396 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 GPATCH4Q5T3I0 446 aaKnown RBP25.76■■□□□ 1.71
APOE-204ENST00000446996 BTNL9Q6UXG8 535 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 PAGR1Q9BTK6 254 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 BTBD7Q9P203 1132 aa25.76■■□□□ 1.71
APOE-204ENST00000446996 VWA5AO00534 786 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 PRC1O43663 620 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 MAPK4P31152 587 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 TRIM17Q9Y577 477 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 SNX14Q9Y5W7 946 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 DOCK3Q8IZD9 2030 aa25.75■■□□□ 1.71
APOE-204ENST00000446996 COL11A1P12107 1806 aaPredicted RBP25.74■■□□□ 1.71
APOE-204ENST00000446996 FMNL1O95466 1100 aaPredicted RBP25.74■■□□□ 1.71
APOE-204ENST00000446996 CTGFP29279 349 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 LIFRP42702 1097 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 CAP1Q01518 475 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 ZNF543Q08ER8 600 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 TMEM67Q5HYA8 995 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 DHX32Q7L7V1 743 aaKnown RBP25.74■■□□□ 1.71
APOE-204ENST00000446996 SHCBP1Q8NEM2 672 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 REPS2Q8NFH8 660 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 TRIM47Q96LD4 638 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 ARHGAP39Q9C0H5 1083 aa25.74■■□□□ 1.71
APOE-204ENST00000446996 ATP2A1O14983 1001 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 ZBED4O75132 1171 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 PSMA5P28066 241 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 EXOSC10Q01780 885 aaKnown RBP25.73■■□□□ 1.71
APOE-204ENST00000446996 ADCK5Q3MIX3 580 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 KCTD1Q719H9 257 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 CHST3Q7LGC8 479 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 COA7Q96BR5 231 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 SPATC1LQ9H0A9 340 aa25.73■■□□□ 1.71
APOE-204ENST00000446996 TNPO2O14787 897 aaKnown RBP25.72■■□□□ 1.71
APOE-204ENST00000446996 SLC25A27O95847 323 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 COPB2P35606 906 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 OAZ1P54368 228 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 CCDC96Q2M329 555 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 ASPRV1Q53RT3 343 aa25.72■■□□□ 1.71
APOE-204ENST00000446996 FBXO46Q6PJ61 603 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms