RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ERLIN1O75477 346 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 ACTN2P35609 894 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 CHRNDQ07001 517 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 RABEP2Q9H5N1 569 aa16.05■□□□□ 0.16
ERCC3-203ENST00000445889 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
ERCC3-203ENST00000445889 NKRFO15226 690 aaKnown RBP eCLIP16.04■□□□□ 0.16
ERCC3-203ENST00000445889 ZNF185O15231 689 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 LEKR1Q6ZMV7 388 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 GOLGA5Q8TBA6 731 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 CTAGE1Q96RT6 745 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 NAA15Q9BXJ9 866 aaKnown RBP16.04■□□□□ 0.16
ERCC3-203ENST00000445889 MYO6Q9UM54 1294 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 ECM29Q5VYK3 1845 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 ALS2Q96Q42 1657 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 CYP2D6P10635 497 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 PAK1Q13153 545 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
ERCC3-203ENST00000445889 MYH8P13535 1937 aa16.04■□□□□ 0.16
ERCC3-203ENST00000445889 ATP1A1P05023 1023 aaKnown RBP16.03■□□□□ 0.16
ERCC3-203ENST00000445889 TROAPQ12815 778 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 IQUBQ8NA54 791 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 RSPH14Q9UHP6 348 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
ERCC3-203ENST00000445889 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
ERCC3-203ENST00000445889 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
ERCC3-203ENST00000445889 RAB21Q9UL25 225 aa16.03■□□□□ 0.16
ERCC3-203ENST00000445889 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
ERCC3-203ENST00000445889 CYP27A1Q02318 531 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 E2F4Q16254 413 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 HSP90B2PQ58FF3 399 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 MSANTD4Q8NCY6 345 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 HNRNPLLQ8WVV9 542 aaKnown RBP16.02■□□□□ 0.16
ERCC3-203ENST00000445889 RASSF4Q9H2L5 321 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
ERCC3-203ENST00000445889 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.15
ERCC3-203ENST00000445889 NDUFA10O95299 355 aa16.02■□□□□ 0.15
ERCC3-203ENST00000445889 IRF2BP1Q8IU81 584 aa16.02■□□□□ 0.15
ERCC3-203ENST00000445889 PSMB7Q99436 277 aa16.02■□□□□ 0.15
ERCC3-203ENST00000445889 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.15
ERCC3-203ENST00000445889 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
ERCC3-203ENST00000445889 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 GNAT2P19087 354 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 DRC1Q96MC2 740 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 MACROD2A1Z1Q3 448 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 RCCD1A6NED2 376 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 USP5P45974 858 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 CCDC122Q5T0U0 273 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 ACSBG1Q96GR2 724 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 LACRTQ9GZZ8 138 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
ERCC3-203ENST00000445889 GNL3LQ9NVN8 582 aaKnown RBP16.01■□□□□ 0.15
ERCC3-203ENST00000445889 PNPLA7Q6ZV29 1317 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 B4DLN1 442 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 KLRK1P26718 216 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 STAT6P42226 847 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 SRLQ86TD4 932 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 TNFRSF25Q93038 417 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 PCMTD1Q96MG8 357 aaPredicted RBP16■□□□□ 0.15
ERCC3-203ENST00000445889 CPVLQ9H3G5 476 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
ERCC3-203ENST00000445889 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
ERCC3-203ENST00000445889 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 KCNQ4P56696 695 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 CTR9Q6PD62 1173 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
ERCC3-203ENST00000445889 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
ERCC3-203ENST00000445889 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 MYBL2P10244 700 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 PIP4K2BP78356 416 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 AMPD2Q01433 879 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 RIOK1Q9BRS2 568 aaKnown RBP15.99■□□□□ 0.15
ERCC3-203ENST00000445889 PSD3Q9NYI0 1048 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 RWDD2AQ9UIY3 292 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
ERCC3-203ENST00000445889 HERVK_113P62684 666 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 WDR59Q6PJI9 974 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
ERCC3-203ENST00000445889 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms