RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SHMT1P34896 483 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 NLRP12P59046 1061 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 KRBA2Q6ZNG9 492 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 CNNM3Q8NE01 707 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 PIBF1Q8WXW3 757 aa17.93■□□□□ 0.46
SNX13-204ENST00000444712 CYTH3O43739 400 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 CLCN1P35523 988 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 CCDC125Q86Z20 511 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 TRIM34Q9BYJ4 488 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 MTMR7Q9Y216 660 aa17.92■□□□□ 0.46
SNX13-204ENST00000444712 CCDC194A0A1B0GVG4 234 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 STXBP3O00186 592 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 ENTPD3O75355 529 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 PDHBP11177 359 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 IQCB1Q15051 598 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 WWC2Q6AWC2 1192 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 PIK3AP1Q6ZUJ8 805 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 FOXP4Q8IVH2 680 aaPredicted RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 PYM1Q9BRP8 204 aaKnown RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 RRAGDQ9NQL2 400 aaPredicted RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 TUBE1Q9UJT0 475 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 SNHG28P0DPA3 235 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 GNA11P29992 359 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 NFIAQ12857 509 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 EARS2Q5JPH6 523 aaKnown RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 C11orf57Q6ZUT1 292 aaPredicted RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.91■□□□□ 0.46
SNX13-204ENST00000444712 GPKOWQ92917 476 aaPredicted RBP eCLIP17.91■□□□□ 0.46
SNX13-204ENST00000444712 RIOX1Q9H6W3 641 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SNX13-204ENST00000444712 ATRNL1Q5VV63 1379 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 FAM205CA6NFA0 338 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
SNX13-204ENST00000444712 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 ZMYND12Q9H0C1 365 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 C6orf50Q9HD87 102 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 ZKSCAN5Q9Y2L8 839 aa17.9■□□□□ 0.46
SNX13-204ENST00000444712 ESYT2A0FGR8 921 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 GOLGA8HP0CJ92 632 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 TPM4P67936 248 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.46
SNX13-204ENST00000444712 SARM1Q6SZW1 724 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 CSRNP2Q9H175 543 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.46
SNX13-204ENST00000444712 ARFGEF1Q9Y6D6 1849 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 M0R2N6 131 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 NAPAP54920 295 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 RSBN1LQ6PCB5 846 aaPredicted RBP17.89■□□□□ 0.45
SNX13-204ENST00000444712 ZSCAN29Q8IWY8 852 aaPredicted RBP17.89■□□□□ 0.45
SNX13-204ENST00000444712 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
SNX13-204ENST00000444712 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 FAM198AQ9UFP1 575 aa17.89■□□□□ 0.45
SNX13-204ENST00000444712 YDJCA8MPS7 323 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 SMTNL1A8MU46 457 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 MPHOSPH10O00566 681 aaKnown RBP17.88■□□□□ 0.45
SNX13-204ENST00000444712 DPEP1P16444 411 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 TGFB2P61812 414 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 ZNF174Q15697 407 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 KRT25Q7Z3Z0 450 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 LARGE2Q8N3Y3 721 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
SNX13-204ENST00000444712 LAD1O00515 517 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 POLR2DO15514 142 aaKnown RBP17.88■□□□□ 0.45
SNX13-204ENST00000444712 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
SNX13-204ENST00000444712 PTGDRQ13258 359 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 LRRC47Q8N1G4 583 aaKnown RBP17.88■□□□□ 0.45
SNX13-204ENST00000444712 TRIM5Q9C035 493 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
SNX13-204ENST00000444712 CDC25BP30305 580 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 TCP10Q12799 353 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 ORC2Q13416 577 aaPredicted RBP17.87■□□□□ 0.45
SNX13-204ENST00000444712 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
SNX13-204ENST00000444712 PPP1R18Q6NYC8 613 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 TATDN1Q6P1N9 297 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 METTL16Q86W50 562 aaKnown RBP17.87■□□□□ 0.45
SNX13-204ENST00000444712 DHX40Q8IX18 779 aaKnown RBP17.87■□□□□ 0.45
SNX13-204ENST00000444712 KANSL2Q9H9L4 492 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 NYAP2Q9P242 653 aa17.87■□□□□ 0.45
SNX13-204ENST00000444712 BRCA1P38398 1863 aaKnown RBP17.87■□□□□ 0.45
SNX13-204ENST00000444712 AP5Z1O43299 807 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
SNX13-204ENST00000444712 KCNA3P22001 575 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 GRIN1Q05586 938 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 ZNF543Q08ER8 600 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 POSTNQ15063 836 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 PLA2G4DQ86XP0 818 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.86■□□□□ 0.45
SNX13-204ENST00000444712 DDTLA6NHG4 134 aaPredicted RBP17.86■□□□□ 0.45
SNX13-204ENST00000444712 POLD1P28340 1107 aa17.86■□□□□ 0.45
SNX13-204ENST00000444712 ZNF75DP51815 510 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms