RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TOP1P11387 765 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 NOVP48745 357 aa20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 TTC14Q96N46 770 aa20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 RLFQ13129 1914 aa20.55■□□□□ 0.88
SMARCAL1-209ENST00000444508 BMP3P12645 472 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 SLC1A4P43007 532 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 ATG4CQ96DT6 458 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 GMCL1Q96IK5 515 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 ZKSCAN3Q9BRR0 538 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 UBAC1Q9BSL1 405 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 FBXO28Q9NVF7 368 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 PPP1R9AQ9ULJ8 1098 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 HPS5Q9UPZ3 1129 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
SMARCAL1-209ENST00000444508 E7EWF7 191 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 CNMDO75829 334 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 MCCP23508 829 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 MAPK4P31152 587 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 Q3C1V9 767 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 POTEEQ6S8J3 1075 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 ZSCAN10Q96SZ4 725 aaPredicted RBP20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 BTBD7Q9P203 1132 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 A0A0G2JMZ2 1700 aa20.53■□□□□ 0.88
SMARCAL1-209ENST00000444508 PRKCZQ05513 592 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 PLS1Q14651 629 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 NCOA7Q8NI08 942 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 RAET1EQ8TD07 263 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 CHMP4CQ96CF2 233 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 PTCH2Q9Y6C5 1203 aa20.52■□□□□ 0.88
SMARCAL1-209ENST00000444508 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 SLC27A2O14975 620 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 RNF20Q5VTR2 975 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 CREB3L3Q68CJ9 461 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 RCSD1Q6JBY9 416 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 PRPF38AQ8NAV1 312 aaKnown RBP20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 PORCNQ9H237 461 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 CTDP1Q9Y5B0 961 aaPredicted RBP20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 TNKSO95271 1327 aa20.51■□□□□ 0.87
SMARCAL1-209ENST00000444508 VWA5AO00534 786 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 STAT2P52630 851 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 CCDC96Q2M329 555 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 WDR78Q5VTH9 848 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 KIFC2Q96AC6 838 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 SPATC1LQ9H0A9 340 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 ADAMTS5Q9UNA0 930 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 TAF6LQ9Y6J9 622 aa20.5■□□□□ 0.87
SMARCAL1-209ENST00000444508 ZBED4O75132 1171 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 FLT3LGP49771 235 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 NECTIN1Q15223 517 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 SLC9C1Q4G0N8 1177 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 STOX1Q6ZVD7 989 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 KCTD1Q719H9 257 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 PLEKHH3Q7Z736 793 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 FAM160B2Q86V87 743 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
SMARCAL1-209ENST00000444508 COL11A1P12107 1806 aaPredicted RBP20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 ERICH2A1L162 156 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 CCDC85CA6NKD9 419 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 REC8O95072 547 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 TMEM132BQ14DG7 1078 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 CYB5R4Q7L1T6 521 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 GPR142Q7Z601 462 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 PNMA1Q8ND90 353 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 SHCBP1Q8NEM2 672 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 ANKS1AQ92625 1134 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 MOV10L1Q9BXT6 1211 aaKnown RBP20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
SMARCAL1-209ENST00000444508 PLA2G6O60733 806 aa20.47■□□□□ 0.87
SMARCAL1-209ENST00000444508 FDX1P10109 184 aa20.47■□□□□ 0.87
SMARCAL1-209ENST00000444508 RASGRP2Q7LDG7 609 aa20.47■□□□□ 0.87
SMARCAL1-209ENST00000444508 SOCS4Q8WXH5 440 aa20.47■□□□□ 0.87
SMARCAL1-209ENST00000444508 NUDT12Q9BQG2 462 aa20.47■□□□□ 0.87
SMARCAL1-209ENST00000444508 HTTP42858 3142 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 IFIT3O14879 490 aaKnown RBP20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 CAPN15O75808 1086 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 SLC25A27O95847 323 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 PDHBP11177 359 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 ZKSCAN1P17029 563 aaPredicted RBP20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 ERCC3P19447 782 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 STAT3P40763 770 aa20.46■□□□□ 0.87
SMARCAL1-209ENST00000444508 IRF5Q13568 498 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms