RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 LMCD1Q9NZU5 365 aa17.77■□□□□ 0.44
SYNCRIP-203ENST00000444272 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 C19orf67A6NJJ6 358 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 ERCC3P19447 782 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 TTLL4Q14679 1199 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 BEND3Q5T5X7 828 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 SLF2Q8IX21 1173 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 RPUSD2Q8IZ73 545 aaKnown RBP17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 C12orf42Q96LP6 360 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 ALG13Q9NP73 1137 aaKnown RBP17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 TRPC6Q9Y210 931 aa17.76■□□□□ 0.43
SYNCRIP-203ENST00000444272 ZNFX1Q9P2E3 1918 aaKnown RBP17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 H3BQ06 376 aaPredicted RBP17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 CD4P01730 458 aa17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 ASGR1P07306 291 aa17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 PKN1Q16512 942 aa17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 FEZ1Q99689 392 aa17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 WNT8AQ9H1J5 351 aa17.75■□□□□ 0.43
SYNCRIP-203ENST00000444272 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 F6X3S4 739 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 HERC4Q5GLZ8 1057 aaPredicted RBP17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 COL26A1Q96A83 441 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 VWCEQ96DN2 955 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 CDCA7LQ96GN5 454 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 IRF2BPLQ9H1B7 796 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 PRKAG3Q9UGI9 489 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 NCOR2Q9Y618 2525 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 CHD6Q8TD26 2715 aa17.74■□□□□ 0.43
SYNCRIP-203ENST00000444272 WDR87Q6ZQQ6 2873 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 PROB1E7EW31 1015 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 VCAM1P19320 739 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 ADHFE1Q8IWW8 467 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 SHCBP1Q8NEM2 672 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 NEK9Q8TD19 979 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 LPIN2Q92539 896 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 SCLYQ96I15 445 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 PI4KBQ9UBF8 816 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
SYNCRIP-203ENST00000444272 TPRP12270 2363 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 GPR75-ASB3A0A0A6YYF3 556 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 TMEM221A6NGB7 291 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 M0R296 226 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 EDAQ92838 391 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 SLC9A7Q96T83 725 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 ABCF2Q9UG63 623 aa17.72■□□□□ 0.43
SYNCRIP-203ENST00000444272 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 ATRXP46100 2492 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 H0Y858 1186 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 C6orf222P0C671 652 aaPredicted RBP17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 NCAPG2Q86XI2 1143 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 PCSK9Q8NBP7 692 aaKnown RBP17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 TLR9Q9NR96 1032 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
SYNCRIP-203ENST00000444272 GVINP1Q7Z2Y8 2422 aa17.7■□□□□ 0.42
SYNCRIP-203ENST00000444272 TRIM67Q6ZTA4 783 aa17.7■□□□□ 0.42
SYNCRIP-203ENST00000444272 FBXL6Q8N531 539 aa17.7■□□□□ 0.42
SYNCRIP-203ENST00000444272 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
SYNCRIP-203ENST00000444272 FAM50BQ9Y247 325 aa17.7■□□□□ 0.42
SYNCRIP-203ENST00000444272 CST5P28325 142 aaPredicted RBP17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 USP14P54578 494 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 VCPP55072 806 aaKnown RBP17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 RNF135Q8IUD6 432 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 HERC6Q8IVU3 1022 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 FSD1Q9BTV5 496 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 MROH8Q9H579 483 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 MTUS1Q9ULD2 1270 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 SCN5AQ14524 2016 aa17.69■□□□□ 0.42
SYNCRIP-203ENST00000444272 PGK2P07205 417 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 FCER1AP12319 257 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 COL9A2Q14055 689 aaPredicted RBP17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 PLS1Q14651 629 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 KCTD2Q14681 263 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 DEFB128Q7Z7B8 93 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 PHOSPHO2Q8TCD6 241 aa17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 BICC1Q9H694 974 aaKnown RBP17.68■□□□□ 0.42
SYNCRIP-203ENST00000444272 SUGCTQ9HAC7 445 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms