RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 A0A0G2JMZ2 1700 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 RPTORQ8N122 1335 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 HIP1O00291 1037 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 HOXC6P09630 235 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 GRB14Q14449 540 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 MAP3K21Q5TCX8 1036 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 PRPF38BQ5VTL8 546 aaKnown RBP22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 ATG4CQ96DT6 458 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 CLIP2Q9UDT6 1046 aa22.37■■□□□ 1.17
ATPAF2-201ENST00000444058 CCDC171Q6TFL3 1326 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 FGAP02671 866 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 HSPD1P10809 573 aaKnown RBP22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 TFAP4Q01664 338 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 GMCL1P1Q8NEA9 526 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 MROH8Q9H579 483 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 HMX1Q9NP08 348 aaPredicted RBP22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 PPP1R9AQ9ULJ8 1098 aa22.36■■□□□ 1.17
ATPAF2-201ENST00000444058 ORC4O43929 436 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 NDUFB10O96000 172 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 ZKSCAN1P17029 563 aaPredicted RBP22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 WDR78Q5VTH9 848 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 UBE2Q1Q7Z7E8 422 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 ZNF589Q86UQ0 364 aaPredicted RBP22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 DEFB118Q96PH6 123 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 CRISPLD2Q9H0B8 497 aa22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.35■■□□□ 1.17
ATPAF2-201ENST00000444058 MKI67P46013 3256 aaKnown RBP22.34■■□□□ 1.17
ATPAF2-201ENST00000444058 VWA5AO00534 786 aa22.34■■□□□ 1.17
ATPAF2-201ENST00000444058 ERCC3P19447 782 aa22.34■■□□□ 1.17
ATPAF2-201ENST00000444058 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
ATPAF2-201ENST00000444058 ABRAQ8N0Z2 381 aa22.34■■□□□ 1.17
ATPAF2-201ENST00000444058 RAD21O60216 631 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 SLC25A27O95847 323 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 CTDSPL2Q05D32 466 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 TMEM132BQ14DG7 1078 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 FAM47AQ5JRC9 791 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 SLF1Q9BQI6 1058 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 DIAPH3Q9NSV4 1193 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 FBXO28Q9NVF7 368 aa22.33■■□□□ 1.17
ATPAF2-201ENST00000444058 PARP14Q460N5 1801 aa22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 TSPY2A6NKD2 308 aa22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 PRKAR2AP13861 404 aaKnown RBP22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 COPB2P35606 906 aa22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 TRIM32Q13049 653 aa22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 PRPF38AQ8NAV1 312 aaKnown RBP22.32■■□□□ 1.16
ATPAF2-201ENST00000444058 PDE4AP27815 886 aa22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 NOVP48745 357 aa22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 PLS1Q14651 629 aa22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 RIOX2Q8IUF8 465 aa22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 ZNF214Q9UL59 606 aaPredicted RBP22.31■■□□□ 1.16
ATPAF2-201ENST00000444058 ZNF236Q9UL36 1845 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 IGHA2P01877 340 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 STAT3P40763 770 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 NT5C2P49902 561 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 CCL14Q16627 93 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 NCAPG2Q86XI2 1143 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 ANKLE1Q8NAG6 615 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 REPS2Q8NFH8 660 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 NUP88Q99567 741 aaPredicted RBP22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 IL17RBQ9NRM6 502 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 SLC5A4Q9NY91 659 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 FEM1BQ9UK73 627 aa22.3■■□□□ 1.16
ATPAF2-201ENST00000444058 ATP2A1O14983 1001 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 RANBP6O60518 1105 aaKnown RBP22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 FARP2O94887 1054 aaPredicted RBP22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 ADORA2AP29274 412 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 CACNB2Q08289 660 aaPredicted RBP22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 TTC22Q5TAA0 569 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 MFSD14CQ5VZR4 134 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 DPP9Q86TI2 863 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 LRRC47Q8N1G4 583 aaKnown RBP22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 GMCL1Q96IK5 515 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 INCENPQ9NQS7 918 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 STX8Q9UNK0 236 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 TACC3Q9Y6A5 838 aa22.29■■□□□ 1.16
ATPAF2-201ENST00000444058 FDX1P10109 184 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 FCER1AP12319 257 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 BMP3P12645 472 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 OLFML2BQ68BL8 750 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 TEX13BQ9BXU2 312 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 RNF41Q9H4P4 317 aaPredicted RBP22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 TCP11L1Q9NUJ3 509 aa22.28■■□□□ 1.16
ATPAF2-201ENST00000444058 MYH4Q9Y623 1939 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 AKNAD1Q5T1N1 836 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 NPLOC4Q8TAT6 608 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 STAG1Q8WVM7 1258 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 HTATIP2Q9BUP3 242 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 DSCC1Q9BVC3 393 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 FLRT1Q9NZU1 646 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 OGDHLQ9ULD0 1010 aa22.27■■□□□ 1.16
ATPAF2-201ENST00000444058 PLA2G6O60733 806 aa22.26■■□□□ 1.15
ATPAF2-201ENST00000444058 ZBED4O75132 1171 aa22.26■■□□□ 1.15
ATPAF2-201ENST00000444058 GSPT1P15170 499 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms