RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
PLOD3-205ENST00000440925 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
PLOD3-205ENST00000440925 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 SNX21Q969T3 373 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 CAPNS2Q96L46 248 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 UBA5Q9GZZ9 404 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
PLOD3-205ENST00000440925 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
PLOD3-205ENST00000440925 BTBD19C9JJ37 291 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
PLOD3-205ENST00000440925 CYTH3O43739 400 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 PLEKHA8P1O95397 391 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
PLOD3-205ENST00000440925 TM4SF4P48230 202 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 GTF2A2P52657 109 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 USP14P54578 494 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 STK3Q13188 491 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 BTNL9Q6UXG8 535 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 DCAF4Q8WV16 495 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 PTPRFP10586 1907 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 NID2Q14112 1375 aa17.4■□□□□ 0.38
PLOD3-205ENST00000440925 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 ZBTB43O43298 467 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 PEX10O60683 326 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 DDAH1O94760 285 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 BMP3P12645 472 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 SLC16A2P36021 539 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 FGD1P98174 961 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 CCL15Q16663 113 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 PROCA1Q8NCQ7 364 aaPredicted RBP17.39■□□□□ 0.37
PLOD3-205ENST00000440925 TMX3Q96JJ7 454 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 P2RX7Q99572 595 aaKnown RBP17.39■□□□□ 0.37
PLOD3-205ENST00000440925 FEZ1Q99689 392 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
PLOD3-205ENST00000440925 GOPCQ9HD26 462 aa17.39■□□□□ 0.37
PLOD3-205ENST00000440925 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
PLOD3-205ENST00000440925 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
PLOD3-205ENST00000440925 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 CETPP11597 493 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 SLC1A4P43007 532 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 MICU3Q86XE3 530 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 LPAR1Q92633 364 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 RLFQ13129 1914 aa17.38■□□□□ 0.37
PLOD3-205ENST00000440925 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 KLRF2D3W0D1 207 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
PLOD3-205ENST00000440925 RAD21O60216 631 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 PLA2G6O60733 806 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 PPFIA3O75145 1194 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 RCAN1P53805 252 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 SNAP25P60880 206 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 RIOX1Q9H6W3 641 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
PLOD3-205ENST00000440925 MANSC4A6NHS7 340 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L15C9J2P7 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L13C9JLJ4 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L11C9JVI0 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L18D6R9N7 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L22D6RA61 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L17D6RBQ6 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L19D6RCP7 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L20D6RJB6 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 ST18O60284 1047 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
PLOD3-205ENST00000440925 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
PLOD3-205ENST00000440925 USP17L24Q0WX57 530 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 GRM1Q13255 1194 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 FASTKD5Q7L8L6 764 aaKnown RBP17.36■□□□□ 0.37
PLOD3-205ENST00000440925 ANKRD23Q86SG2 305 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 REPS2Q8NFH8 660 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 MTMR8Q96EF0 704 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
PLOD3-205ENST00000440925 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
PLOD3-205ENST00000440925 LOC285556D6RIA3 1793 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 PDHXO00330 501 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 CNMDO75829 334 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 CALM1P0DP23 149 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 CALM2P0DP24 149 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 CALM3P0DP25 149 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 DSG3P32926 999 aa17.35■□□□□ 0.37
PLOD3-205ENST00000440925 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms