RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RAD50Q92878 1312 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 COL11A1P12107 1806 aaPredicted RBP27.98■■■□□ 2.07
VARS-217ENST00000440048 POTEFA5A3E0 1075 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 ZNF213O14771 459 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 NMT2O60551 498 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 ELNP15502 786 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 PPP4R3BQ5MIZ7 849 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 GPR142Q7Z601 462 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 PLEKHH3Q7Z736 793 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 MB21D1Q8N884 522 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 PXYLP1Q8TE99 480 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 STAG1Q8WVM7 1258 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 RUFY2Q8WXA3 655 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 CCDC136Q96JN2 1154 aa27.98■■■□□ 2.07
VARS-217ENST00000440048 BIN2Q9UBW5 565 aaPredicted RBP27.98■■■□□ 2.07
VARS-217ENST00000440048 NEFLP07196 543 aa27.97■■■□□ 2.07
VARS-217ENST00000440048 PCP11498 1178 aaKnown RBP27.97■■■□□ 2.07
VARS-217ENST00000440048 MFSD6Q6ZSS7 791 aa27.97■■■□□ 2.07
VARS-217ENST00000440048 GMCL1P1Q8NEA9 526 aa27.97■■■□□ 2.07
VARS-217ENST00000440048 PPP1R9AQ9ULJ8 1098 aa27.97■■■□□ 2.07
VARS-217ENST00000440048 ADAMTS5Q9UNA0 930 aa27.97■■■□□ 2.07
VARS-217ENST00000440048 MTFR1Q15390 333 aa27.96■■■□□ 2.07
VARS-217ENST00000440048 NUDT12Q9BQG2 462 aa27.96■■■□□ 2.07
VARS-217ENST00000440048 SPATC1LQ9H0A9 340 aa27.96■■■□□ 2.07
VARS-217ENST00000440048 RNF41Q9H4P4 317 aaPredicted RBP27.96■■■□□ 2.07
VARS-217ENST00000440048 CWC22Q9HCG8 908 aaKnown RBP27.96■■■□□ 2.07
VARS-217ENST00000440048 STX8Q9UNK0 236 aa27.96■■■□□ 2.07
VARS-217ENST00000440048 WDR78Q5VTH9 848 aa27.95■■■□□ 2.06
VARS-217ENST00000440048 SLFN13Q68D06 897 aa27.95■■■□□ 2.06
VARS-217ENST00000440048 SOCS4Q8WXH5 440 aa27.95■■■□□ 2.06
VARS-217ENST00000440048 MOV10L1Q9BXT6 1211 aaKnown RBP27.95■■■□□ 2.06
VARS-217ENST00000440048 CTNNA3Q9UI47 895 aa27.95■■■□□ 2.06
VARS-217ENST00000440048 CYP2B6P20813 491 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 NOVP48745 357 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 UBXN2AP68543 259 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 MORN1Q5T089 497 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 NKX2-3Q8TAU0 364 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 USP6NLQ92738 828 aa27.94■■■□□ 2.06
VARS-217ENST00000440048 VWA5AO00534 786 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 INHAP05111 366 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 PLS1Q14651 629 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 TMEM132BQ14DG7 1078 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 IMMTQ16891 758 aaKnown RBP27.93■■■□□ 2.06
VARS-217ENST00000440048 SLF1Q9BQI6 1058 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 TCP11L1Q9NUJ3 509 aa27.93■■■□□ 2.06
VARS-217ENST00000440048 NEDD4P46934 1319 aa27.92■■■□□ 2.06
VARS-217ENST00000440048 SGSM2O43147 1006 aa27.92■■■□□ 2.06
VARS-217ENST00000440048 PTPREP23469 700 aa27.92■■■□□ 2.06
VARS-217ENST00000440048 SHCBP1Q8NEM2 672 aa27.92■■■□□ 2.06
VARS-217ENST00000440048 XRCC5P13010 732 aaKnown RBP27.91■■■□□ 2.06
VARS-217ENST00000440048 CCL5P13501 91 aa27.91■■■□□ 2.06
VARS-217ENST00000440048 EN2P19622 333 aaPredicted RBP27.91■■■□□ 2.06
VARS-217ENST00000440048 PTH1RQ03431 593 aa27.91■■■□□ 2.06
VARS-217ENST00000440048 SLC15A5A6NIM6 579 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 BMP3P12645 472 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 ERCC3P19447 782 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 RGS2P41220 211 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 PRPF38AQ8NAV1 312 aaKnown RBP27.9■■■□□ 2.06
VARS-217ENST00000440048 REPS2Q8NFH8 660 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 ESR2Q92731 530 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 CHMP4CQ96CF2 233 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 GMCL1Q96IK5 515 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 FEM1BQ9UK73 627 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 IVNS1ABPQ9Y6Y0 642 aa27.9■■■□□ 2.06
VARS-217ENST00000440048 MCCP23508 829 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 MAP2K5Q13163 448 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 BMP2KLQ5H9B9 411 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 TRIB2Q92519 343 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 RNF208Q9H0X6 261 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 UNC93B1Q9H1C4 597 aa27.89■■■□□ 2.06
VARS-217ENST00000440048 HMGCRP04035 888 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 CENPBP07199 599 aaPredicted RBP27.88■■■□□ 2.05
VARS-217ENST00000440048 GRB14Q14449 540 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 NCAPG2Q86XI2 1143 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 KIFC2Q96AC6 838 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 TMEM47Q9BQJ4 181 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 MROH8Q9H579 483 aa27.88■■■□□ 2.05
VARS-217ENST00000440048 ZNF214Q9UL59 606 aaPredicted RBP27.88■■■□□ 2.05
VARS-217ENST00000440048 TOP1P11387 765 aaKnown RBP27.87■■■□□ 2.05
VARS-217ENST00000440048 STAT3P40763 770 aa27.87■■■□□ 2.05
VARS-217ENST00000440048 SLC1A4P43007 532 aa27.87■■■□□ 2.05
VARS-217ENST00000440048 NT5C2P49902 561 aa27.87■■■□□ 2.05
VARS-217ENST00000440048 RCSD1Q6JBY9 416 aa27.87■■■□□ 2.05
VARS-217ENST00000440048 APBA2Q99767 749 aa27.87■■■□□ 2.05
VARS-217ENST00000440048 ISY1Q9ULR0 285 aaKnown RBP27.87■■■□□ 2.05
VARS-217ENST00000440048 ZNFX1Q9P2E3 1918 aaKnown RBP27.86■■■□□ 2.05
VARS-217ENST00000440048 ZNF236Q9UL36 1845 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 B4E1Z4 1266 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 TMEM232C9JQI7 657 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 STRNO43815 780 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 KDM4AO75164 1064 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 SLC25A27O95847 323 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 TRIM32Q13049 653 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 RASGRP2Q7LDG7 609 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 RIOX2Q8IUF8 465 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 TRMT44Q8IYL2 757 aaKnown RBP27.86■■■□□ 2.05
VARS-217ENST00000440048 TTC14Q96N46 770 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 MTMR7Q9Y216 660 aa27.86■■■□□ 2.05
VARS-217ENST00000440048 MKI67P46013 3256 aaKnown RBP27.86■■■□□ 2.05
VARS-217ENST00000440048 GJB1P08034 283 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms