RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MCM7P33993 719 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 NF2P35240 595 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 PTPROQ16827 1216 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 PAGE5Q96GU1 130 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC114Q96M63 670 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-209ENST00000439886 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-209ENST00000439886 AGLP35573 1532 aa13.08□□□□□ -0.32
SMPD4-209ENST00000439886 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 TTC26A0AVF1 554 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 ESYT3A0FGR9 886 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 OPA1O60313 960 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 XBP1P17861 261 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 TOB1P50616 345 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-209ENST00000439886 HLTFQ14527 1009 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMPD4-209ENST00000439886 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 HDAC7Q8WUI4 952 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 SH2B2O14492 632 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-209ENST00000439886 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-209ENST00000439886 MTIF2P46199 727 aaKnown RBP13.07□□□□□ -0.32
SMPD4-209ENST00000439886 PAK1Q13153 545 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 IQCEQ6IPM2 695 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 ZSWIM5Q9P217 1185 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 PAFAH1B1P43034 410 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 GUCY1A3Q02108 690 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 LRRC1Q9BTT6 524 aa13.07□□□□□ -0.32
SMPD4-209ENST00000439886 E7EVH7 732 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 AKR1B10O60218 316 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 KRT14P02533 472 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 KRT26Q7Z3Y9 468 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 BAZ2BQ9UIF8 2168 aaKnown RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 GCP02774 474 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 MMP1P03956 469 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 RPSAP08865 295 aaKnown RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 TMEM132AQ24JP5 1023 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 SLC4A4Q9Y6R1 1079 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 SEC24CP53992 1094 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 KRT83P78385 493 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 APBA1Q02410 837 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 N4BP2L2Q92802 583 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
SMPD4-209ENST00000439886 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
SMPD4-209ENST00000439886 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 A0A087X0B3 334 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 B4DLN1 442 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 MBD4O95243 580 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 IRX1P78414 480 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 TBC1D8BQ0IIM8 1120 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 CUL4BQ13620 913 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 CCNI2Q6ZMN8 369 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC43Q96MW1 224 aaKnown RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 LACRTQ9GZZ8 138 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
SMPD4-209ENST00000439886 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
SMPD4-209ENST00000439886 BUB1O43683 1085 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 PEX19P40855 299 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 DPYDQ12882 1025 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 NNTQ13423 1086 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MIEF2Q96C03 454 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 SUDS3Q9H7L9 328 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-209ENST00000439886 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 UTYO14607 1347 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 GOLGA6L10A6NI86 522 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 SNAP23O00161 211 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-209ENST00000439886 NCK2O43639 380 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms