RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-202ENST00000439724 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 SARM1Q6SZW1 724 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 DEFB132Q7Z7B7 95 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-202ENST00000439724 PSMD1Q99460 953 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-202ENST00000439724 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
SMAD3-202ENST00000439724 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
SMAD3-202ENST00000439724 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 C21orf2O43822 256 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 TTLL1O95922 423 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 PDHBP11177 359 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 DPCR1Q3MIW9 517 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 METTL16Q86W50 562 aaKnown RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 DHX40Q8IX18 779 aaKnown RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 FAM198AQ9UFP1 575 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
SMAD3-202ENST00000439724 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
SMAD3-202ENST00000439724 A0A087WWV3 80 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-202ENST00000439724 USP17L5A8MUK1 530 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ADAMTS3O15072 1205 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ZNF75DP51815 510 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ZNF174Q15697 407 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 SPECC1Q5M775 1068 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 HEATR3Q7Z4Q2 680 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 PLA2G4DQ86XP0 818 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
SMAD3-202ENST00000439724 ESYT2A0FGR8 921 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 BECN2A8MW95 431 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 ENTPD3O75355 529 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 TPM3P06753 285 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 CDC25BP30305 580 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 RBM5P52756 815 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 MDM2Q00987 491 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 PTGDRQ13258 359 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 ARL6IP4Q66PJ3 421 aaKnown RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 KANK3Q6NY19 840 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 ZFPM1Q8IX07 1006 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 VPS33BQ9H267 617 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 SEC63Q9UGP8 760 aaKnown RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 PCDHA6Q9UN73 950 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 PCDHA8Q9Y5H6 950 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 DPEP1P16444 411 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 KCNA3P22001 575 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 NAPAP54920 295 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 PNOCQ13519 176 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 FOXP4Q8IVH2 680 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 CLIP2Q9UDT6 1046 aa13.44□□□□□ -0.26
SMAD3-202ENST00000439724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMAD3-202ENST00000439724 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-202ENST00000439724 BIN1O00499 593 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 POLR2DO15514 142 aaKnown RBP13.43□□□□□ -0.26
SMAD3-202ENST00000439724 GNA11P29992 359 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 CACNB3P54284 484 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 TCP10Q12799 353 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 POSTNQ15063 836 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
SMAD3-202ENST00000439724 NT5DC1Q5TFE4 455 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 TATDN1Q6P1N9 297 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 SH3BP5LQ7L8J4 393 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 KRT25Q7Z3Z0 450 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 CCDC34Q96HJ3 373 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 PIGSQ96S52 555 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms