RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-203ENST00000438862 FEZ1Q99689 392 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 DNAJC18Q9H819 358 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 ZNF236Q9UL36 1845 aa13.73□□□□□ -0.21
CSTF3-203ENST00000438862 PTPRCP08575 1304 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 SH3RF3Q8TEJ3 882 aaPredicted RBP13.72□□□□□ -0.21
CSTF3-203ENST00000438862 EPHX3Q9H6B9 360 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 AKAP2Q9Y2D5 859 aa13.72□□□□□ -0.21
CSTF3-203ENST00000438862 PIEZO1Q92508 2521 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 SMCHD1A6NHR9 2005 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 A0A1W2PQ45 241 aaPredicted RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 A0A1W2PQY0 241 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 GPR37L1O60883 481 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 ABRAQ8N0Z2 381 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 TSEN34Q9BSV6 310 aaKnown RBP13.71□□□□□ -0.21
CSTF3-203ENST00000438862 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
CSTF3-203ENST00000438862 COBLO75128 1261 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 GH2P01242 217 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 HLA-DOAP06340 250 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 VCAM1P19320 739 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 PPP4CP60510 307 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
CSTF3-203ENST00000438862 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 SPATA5Q8NB90 893 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 TGFBRAP1Q8WUH2 860 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
CSTF3-203ENST00000438862 MROH8Q9H579 483 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 HDAC5Q9UQL6 1122 aa13.7□□□□□ -0.22
CSTF3-203ENST00000438862 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 ERC2O15083 957 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 COG2Q14746 738 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 MAML3Q96JK9 1138 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 SPATC1LQ9H0A9 340 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
CSTF3-203ENST00000438862 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
CSTF3-203ENST00000438862 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 TBX21Q9UL17 535 aa13.69□□□□□ -0.22
CSTF3-203ENST00000438862 FLT1P17948 1338 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 PGK1P00558 417 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 ERCC3P19447 782 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 TFF2Q03403 129 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
CSTF3-203ENST00000438862 SNX27Q96L92 541 aa13.68□□□□□ -0.22
CSTF3-203ENST00000438862 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
CSTF3-203ENST00000438862 SALL2Q9Y467 1007 aaPredicted RBP13.68□□□□□ -0.22
CSTF3-203ENST00000438862 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
CSTF3-203ENST00000438862 KCNQ1P51787 676 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 ACLYP53396 1101 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 GORABQ5T7V8 394 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
CSTF3-203ENST00000438862 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 COG5Q9UP83 839 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 PA2G4Q9UQ80 394 aaKnown RBP13.67□□□□□ -0.22
CSTF3-203ENST00000438862 FOCADQ5VW36 1801 aa13.67□□□□□ -0.22
CSTF3-203ENST00000438862 ZNF521Q96K83 1311 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
CSTF3-203ENST00000438862 IGSF3O75054 1194 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 FCER1AP12319 257 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 AKR1A1P14550 325 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 CSF2RAP15509 400 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
CSTF3-203ENST00000438862 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
CSTF3-203ENST00000438862 ELP1O95163 1332 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms