RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 YBX2Q9Y2T7 364 aaKnown RBP5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 KIF21AQ7Z4S6 1674 aa5.28□□□□□ -1.56
HMGB1P18-201ENST00000438801 KIF13AQ9H1H9 1805 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 SLC22A31A6NKX4 558 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 NMIQ13287 307 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 SNX17Q15036 470 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 CWF19L2Q2TBE0 894 aaKnown RBP5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 CIAPIN1Q6FI81 312 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 FBXL19Q6PCT2 694 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ERMP1Q7Z2K6 904 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZNF605Q86T29 641 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 AMIGO3Q86WK7 504 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ANKS4BQ8N8V4 417 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ENOX1Q8TC92 643 aaKnown RBP5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 INTS4Q96HW7 963 aaKnown RBP5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 MCOLN1Q9GZU1 580 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 EBF1Q9UH73 591 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZNF281Q9Y2X9 895 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 ROBO2Q9HCK4 1378 aa5.27□□□□□ -1.57
HMGB1P18-201ENST00000438801 UBOX5O94941 541 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 RNF4P78317 190 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 LINC01599Q8WXQ3 324 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 G6PC3Q9BUM1 346 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 LRRC3Q9BY71 257 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 COPRSQ9NQ92 184 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 KCNQ5Q9NR82 932 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 SUPT16HQ9Y5B9 1047 aaKnown RBP5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 PCDHB14Q9Y5E9 798 aa5.26□□□□□ -1.57
HMGB1P18-201ENST00000438801 MYOCOSA0A1B0GUC4 107 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 NUAK1O60285 661 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 PSPNO60542 156 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 GREM1O60565 184 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 PEX10O60683 326 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 RAG1P15918 1043 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 RPL10P27635 214 aaKnown RBP5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 PDE6BP35913 854 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 EIF4A3P38919 411 aaKnown RBP5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 LINC00310P59036 64 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 CCDC27Q2M243 656 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 RNF111Q6ZNA4 994 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 USHBP1Q8N6Y0 703 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 DAGLBQ8NCG7 672 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 SHISA4Q96DD7 197 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZNF552Q9H707 407 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 GMIPQ9P107 970 aa5.25□□□□□ -1.57
HMGB1P18-201ENST00000438801 NOTOA8MTQ0 251 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 SEMA7AO75326 666 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 ATE1O95260 518 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 GALK1P51570 392 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 DLG4P78352 724 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 NBPF12Q5TAG4 269 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZNF296Q8WUU4 475 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 TCTN2Q96GX1 697 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 FOXP3Q9BZS1 431 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZMYM5Q9UJ78 669 aa5.24□□□□□ -1.57
HMGB1P18-201ENST00000438801 RSF1Q96T23 1441 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 USP2O75604 605 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 CRKP46108 304 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 NBPF9Q3BBW0 867 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 CDCP2Q5VXM1 449 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 OVOS1Q6IE37 1185 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 TMEM132EQ6IEE7 984 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 LILRA6Q6PI73 481 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 TTLL10Q6ZVT0 673 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 WAPLQ7Z5K2 1190 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 TMC3Q7Z5M5 1100 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 ZNF655Q8N720 491 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 TCFL5Q9UL49 500 aa5.23□□□□□ -1.57
HMGB1P18-201ENST00000438801 TEX51A0A1B0GUA7 166 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 SSU72P8A0A1W2PR75 194 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 OR14I1A6ND48 311 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 KIR2DL1P43626 348 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 KIR2DL2P43627 348 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 PCBP3P57721 371 aaKnown RBP5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 RAD51AP2Q09MP3 1159 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 SNW1Q13573 536 aaKnown RBP5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 SLC14A2Q15849 920 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 SIRT2Q8IXJ6 389 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 LINC00116Q8NCU8 138 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 ATG4CQ96DT6 458 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 MAP6Q96JE9 813 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 GZF1Q9H116 711 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 CNNM2Q9H8M5 875 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 EHMT1Q9H9B1 1298 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 RAPGEFL1Q9UHV5 662 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 GGT7Q9UJ14 662 aa5.22□□□□□ -1.57
HMGB1P18-201ENST00000438801 TMEM82A0PJX8 343 aa5.21□□□□□ -1.58
HMGB1P18-201ENST00000438801 NRDCO43847 1150 aa5.21□□□□□ -1.58
HMGB1P18-201ENST00000438801 CLEC3AO75596 197 aa5.21□□□□□ -1.58
HMGB1P18-201ENST00000438801 PRAMEF1O95521 474 aa5.21□□□□□ -1.58
HMGB1P18-201ENST00000438801 EFEMP2O95967 443 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms