RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 CLEC17AQ6ZS10 378 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 EDC3Q96F86 508 aaKnown RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 INTS4Q96HW7 963 aaKnown RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 TTC14Q96N46 770 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 MPHOSPH8Q99549 860 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 SLKQ9H2G2 1235 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 BSDC1Q9NW68 430 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P6-201ENST00000438508 TAF1P21675 1872 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 MED26O95402 600 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 ZKSCAN1P17029 563 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 PSMA5P28066 241 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 TM4SF1P30408 202 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 GDF10P55107 478 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 UBE4AQ14139 1066 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 TTF1Q15361 905 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 TTC39AQ5SRH9 613 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 GORABQ5T7V8 394 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 LCE4AQ5TA78 99 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 CREB3L3Q68CJ9 461 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 DNAJC2Q99543 621 aaKnown RBP8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 DSCC1Q9BVC3 393 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 RBM8AQ9Y5S9 174 aaKnown RBP8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 C4AP0C0L4 1744 aa8.49□□□□□ -1.05
HMGN1P6-201ENST00000438508 A0A1B0GUL6 1792 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 GOLIM4O00461 696 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 SLC27A2O14975 620 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 SLC5A1P13866 664 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 RFC4P35249 363 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 IREB2P48200 963 aaKnown RBP8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 SFSWAPQ12872 951 aaKnown RBP8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 RAB3GAP1Q15042 981 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 VPS53Q5VIR6 699 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 CCDC102BQ68D86 513 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 BICDL1Q6ZP65 573 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 DDX46Q7L014 1031 aaKnown RBP8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 ZNF589Q86UQ0 364 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 TMX3Q96JJ7 454 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 MEGF10Q96KG7 1140 aa8.48□□□□□ -1.05
HMGN1P6-201ENST00000438508 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 IGSF3O75054 1194 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 CYP2E1P05181 493 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 MCAMP43121 646 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 ZAP70P43403 619 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 RPS8P62241 208 aaKnown RBP8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 NUCB2P80303 420 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 CHRNDQ07001 517 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 KRT32Q14532 448 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 UBE3CQ15386 1083 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 ZSCAN25Q6NSZ9 544 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 RUFY3Q7L099 469 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 AMIGO3Q86WK7 504 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 ZSCAN31Q96LW9 406 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 SRP68Q9UHB9 627 aaKnown RBP8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 CYP46A1Q9Y6A2 500 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 NDUFB9Q9Y6M9 179 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 LAMA4Q16363 1823 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
HMGN1P6-201ENST00000438508 FRAT2O75474 233 aaPredicted RBP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 TRIM37O94972 964 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 HSP90AA1P07900 732 aaKnown RBP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 AFF1P51825 1210 aaKnown RBP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 NFIXQ14938 502 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 TXNRD1Q16881 649 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 ADCK5Q3MIX3 580 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 FBXO11Q86XK2 927 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 APPBP2Q92624 585 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 OSBP2Q969R2 916 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 SEC62Q99442 399 aaKnown RBP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 LIMCH1Q9UPQ0 1083 aa8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
HMGN1P6-201ENST00000438508 KLRG2A4D1S0 409 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 GPR37L1O60883 481 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 HSPD1P10809 573 aaKnown RBP8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 GYS1P13807 737 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 MCM4P33991 863 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 ADD2P35612 726 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 PHKA1P46020 1223 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 KCNJ4P48050 445 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 TMED8Q6PL24 325 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 SMIM5Q71RC9 77 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 FBXO33Q7Z6M2 555 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 FBXL16Q8N461 479 aa8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 UPF3BQ9BZI7 483 aaKnown RBP8.45□□□□□ -1.06
HMGN1P6-201ENST00000438508 ANKRD2Q9GZV1 360 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms