RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
TTC3-209ENST00000438055 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
TTC3-209ENST00000438055 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
TTC3-209ENST00000438055 FANCGO15287 622 aa18.89■□□□□ 0.62
TTC3-209ENST00000438055 KIF20AO95235 890 aa18.89■□□□□ 0.62
TTC3-209ENST00000438055 H2AFXP16104 143 aaPredicted RBP18.89■□□□□ 0.62
TTC3-209ENST00000438055 STIM1Q13586 685 aa18.89■□□□□ 0.62
TTC3-209ENST00000438055 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.62
TTC3-209ENST00000438055 ADD3Q9UEY8 706 aaKnown RBP18.89■□□□□ 0.62
TTC3-209ENST00000438055 KCNJ18B7U540 433 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 RPN1P04843 607 aaKnown RBP18.89■□□□□ 0.61
TTC3-209ENST00000438055 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■■■■□ 21.8
TTC3-209ENST00000438055 KCNJ12Q14500 433 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 ANKRD2Q9GZV1 360 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 RMND1Q9NWS8 449 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 PPP1R3GB7ZBB8 358 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 GTPBP6O43824 516 aaPredicted RBP18.89■□□□□ 0.61
TTC3-209ENST00000438055 XDHP47989 1333 aa18.89■□□□□ 0.61
TTC3-209ENST00000438055 TRIM49BA6NDI0 452 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 MFAP3LO75121 409 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 SPAG1Q07617 926 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 TERF2Q15554 542 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
TTC3-209ENST00000438055 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
TTC3-209ENST00000438055 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 GUCA1BQ9UMX6 200 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 ADGRG1Q9Y653 693 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 LETM2Q2VYF4 491 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 CCDC178Q5BJE1 867 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 WWC2Q6AWC2 1192 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 PANX2Q96RD6 677 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 LRP6O75581 1613 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 RHOXF2BP0C7M4 288 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
TTC3-209ENST00000438055 COPB1P53618 953 aaKnown RBP18.88■□□□□ 0.61
TTC3-209ENST00000438055 RHOXF2Q9BQY4 288 aa18.88■□□□□ 0.61
TTC3-209ENST00000438055 CTAGE9A4FU28 777 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 FBXO33Q7Z6M2 555 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 CCDC47Q96A33 483 aaKnown RBP18.87■□□□□ 0.61
TTC3-209ENST00000438055 RAD21O60216 631 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 NAPAP54920 295 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
TTC3-209ENST00000438055 C4AP0C0L4 1744 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 C4BP0C0L5 1744 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 IPO7O95373 1038 aaKnown RBP18.87■□□□□ 0.61
TTC3-209ENST00000438055 BAG3O95817 575 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 MCM6Q14566 821 aa18.87■□□□□ 0.61
TTC3-209ENST00000438055 SOGA3Q5TF21 947 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 SLC35F6Q8N357 371 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 PARD6BQ9BYG5 372 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 MRFAP1Q9Y605 127 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 ORC4O43929 436 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 MAP3K9P80192 1104 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 GPIHBP1Q8IV16 184 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 GPR161Q8N6U8 529 aaKnown RBP18.86■□□□□ 0.61
TTC3-209ENST00000438055 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 TCP11L1Q9NUJ3 509 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 NUP98P52948 1817 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 GYPCP04921 128 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 PRCPP42785 496 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 SPATA20Q8TB22 786 aa18.86■□□□□ 0.61
TTC3-209ENST00000438055 SH3RF3Q8TEJ3 882 aaPredicted RBP18.86■□□□□ 0.61
TTC3-209ENST00000438055 NAA15Q9BXJ9 866 aaKnown RBP18.86■□□□□ 0.61
TTC3-209ENST00000438055 TRAPPC10P48553 1259 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 C8orf37Q96NL8 207 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 PAPPAQ13219 1627 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 PSMA7O14818 248 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 TMTC1Q8IUR5 882 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 CCDC148Q8NFR7 591 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 PCDHA4Q9UN74 947 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 FHOD1Q9Y613 1164 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 FAM205AQ6ZU69 1335 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 SEMA3EO15041 775 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 MARCH6O60337 910 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 GNAQP50148 359 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 ASIC1P78348 528 aa18.85■□□□□ 0.61
TTC3-209ENST00000438055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.85■□□□□ 0.615e-6■□□□□ 9.7
TTC3-209ENST00000438055 RTCBQ9Y3I0 505 aaKnown RBP18.85■□□□□ 0.61
TTC3-209ENST00000438055 NID2Q14112 1375 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 TFRCP02786 760 aaKnown RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 TRIM21P19474 475 aaKnown RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 NPY5RQ15761 445 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 SH3RF1Q7Z6J0 888 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 KIAA1328Q86T90 577 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 LUC7L2Q9Y383 392 aaKnown RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 ERCC3P19447 782 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 ZNF658Q5TYW1 1059 aaPredicted RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 CYP26C1Q6V0L0 522 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 COL1A1P02452 1464 aaPredicted RBP18.84■□□□□ 0.61
TTC3-209ENST00000438055 SLIT2O94813 1529 aa18.84■□□□□ 0.61
TTC3-209ENST00000438055 CCNT1O60563 726 aaKnown RBP18.83■□□□□ 0.61
TTC3-209ENST00000438055 RFC4P35249 363 aa18.83■□□□□ 0.61
TTC3-209ENST00000438055 LONP1P36776 959 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms