RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
LINC01039-201ENST00000437113 ISY1Q9ULR0 285 aaKnown RBP12.22□□□□□ -0.45
LINC01039-201ENST00000437113 LOC285556D6RIA3 1793 aa12.22□□□□□ -0.45
LINC01039-201ENST00000437113 IGKV6D-41A0A0C4DH26 115 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 CCDC196A0A1B0GTZ2 297 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 USP17L10C9JJH3 530 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 USP14P54578 494 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 BACE1P56817 501 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 JAG1P78504 1218 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 SCRN1Q12765 414 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 RTN1Q16799 776 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 ZIC5Q96T25 663 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 FEZ1Q99689 392 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 NCOA5Q9HCD5 579 aaKnown RBP12.21□□□□□ -0.45
LINC01039-201ENST00000437113 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.45
LINC01039-201ENST00000437113 CDKL5O76039 1030 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 KIF5BP33176 963 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 CUL4AQ13619 759 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 INTS4Q96HW7 963 aaKnown RBP12.2□□□□□ -0.46
LINC01039-201ENST00000437113 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
LINC01039-201ENST00000437113 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 NYAP2Q9P242 653 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
LINC01039-201ENST00000437113 NID2Q14112 1375 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
LINC01039-201ENST00000437113 GUCY1A2P33402 732 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 PABPC4Q13310 644 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01039-201ENST00000437113 MTMR2Q13614 643 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 PPP2R5BQ15173 497 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 CCDC96Q2M329 555 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 USP17L2Q6R6M4 530 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 ANKRD23Q86SG2 305 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 FANCBQ8NB91 859 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.19□□□□□ -0.46
LINC01039-201ENST00000437113 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
LINC01039-201ENST00000437113 BTBD19C9JJ37 291 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01039-201ENST00000437113 NOVP48745 357 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 TROAPQ12815 778 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
LINC01039-201ENST00000437113 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 LPAR1Q92633 364 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 C12orf42Q96LP6 360 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 PTPN18Q99952 460 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
LINC01039-201ENST00000437113 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 AGTPBP1Q9UPW5 1226 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
LINC01039-201ENST00000437113 PTPDC1A2A3K4 754 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 TRPA1O75762 1119 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 GJB2P29033 226 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 GNAQP50148 359 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 HMGCS2P54868 508 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 HMGN5P82970 282 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 ST3GAL1Q11201 340 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 MOGSQ13724 837 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 GRM4Q14833 912 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 MKL1Q969V6 931 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
LINC01039-201ENST00000437113 CWC22Q9HCG8 908 aaKnown RBP12.17□□□□□ -0.46
LINC01039-201ENST00000437113 PDHXO00330 501 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 PDHBP11177 359 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 CDC27P30260 824 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 SLC1A4P43007 532 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
LINC01039-201ENST00000437113 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 FAM43AQ8N2R8 423 aa12.16□□□□□ -0.46
LINC01039-201ENST00000437113 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms