RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 WHAMMP3Q1A5X7 153 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 SDR42E1Q8WUS8 393 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 ACSBG1Q96GR2 724 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 EHD4Q9H223 541 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 ABCF2Q9UG63 623 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 GYPCP04921 128 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 PLCD1P51178 756 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 APTXQ7Z2E3 356 aaKnown RBP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 MSL3Q8N5Y2 521 aaKnown RBP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 CABP5Q9NP86 173 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 NIP7Q9Y221 180 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 SLIT2O94813 1529 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 ERVK-24P63145 666 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 MMS22LQ6ZRQ5 1243 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
TMEM116-202ENST00000437003 TFR2Q9UP52 801 aa13.94□□□□□ -0.18
TMEM116-202ENST00000437003 SRGAP2O75044 1071 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 PRPF6O94906 941 aaKnown RBP13.93□□□□□ -0.18
TMEM116-202ENST00000437003 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
TMEM116-202ENST00000437003 IFNAR1P17181 557 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 GNAT2P19087 354 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 WASF1Q92558 559 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 KAT2BQ92831 832 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 HPCAL4Q9UM19 191 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
TMEM116-202ENST00000437003 SYNRGQ9UMZ2 1314 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
TMEM116-202ENST00000437003 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 RNF225M0QZC1 329 aaPredicted RBP13.93□□□□□ -0.18
TMEM116-202ENST00000437003 GGCXP38435 758 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 UBAC1Q9BSL1 405 aa13.93□□□□□ -0.18
TMEM116-202ENST00000437003 ERLIN2O94905 339 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 ARHGAP25P42331 645 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 SARSP49591 514 aaKnown RBP13.92□□□□□ -0.18
TMEM116-202ENST00000437003 PARP10Q53GL7 1025 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 FBXW10Q5XX13 1052 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
TMEM116-202ENST00000437003 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
TMEM116-202ENST00000437003 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
TMEM116-202ENST00000437003 FBXO2Q9UK22 296 aaPredicted RBP13.92□□□□□ -0.18
TMEM116-202ENST00000437003 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 PRDM1O75626 825 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 SIK1P57059 783 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 CHRNDQ07001 517 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 TUBB2AQ13885 445 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 DDB1Q16531 1140 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 MCTP2Q6DN12 878 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 TUBB2BQ9BVA1 445 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
TMEM116-202ENST00000437003 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 MNAT1P51948 309 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 STIM1Q13586 685 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 ZNF654Q8IZM8 581 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 STAMQ92783 540 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 MMS19Q96T76 1030 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 CRACR2AQ9BSW2 395 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 VPS16Q9H269 839 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 LRP5O75197 1615 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
TMEM116-202ENST00000437003 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 PTPREP23469 700 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 AMPD2Q01433 879 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 RILPL1Q5EBL4 403 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 TMTC2Q8N394 836 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 CRACR2BQ8N4Y2 399 aaPredicted RBP13.91□□□□□ -0.18
TMEM116-202ENST00000437003 FANCBQ8NB91 859 aa13.91□□□□□ -0.18
TMEM116-202ENST00000437003 CHD4Q14839 1912 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 ACTN4O43707 911 aaKnown RBP13.9□□□□□ -0.18
TMEM116-202ENST00000437003 DEXIO95424 95 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 CYP7A1P22680 504 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 TUBB4BP68371 445 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 ADGRA1Q86SQ6 560 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 EGFL6Q8IUX8 553 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
TMEM116-202ENST00000437003 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
TMEM116-202ENST00000437003 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 WTIPA6NIX2 430 aaPredicted RBP13.9□□□□□ -0.18
TMEM116-202ENST00000437003 NTSR2O95665 410 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 CPP00450 1065 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 MYBL2P10244 700 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 PBX1P40424 430 aa13.9□□□□□ -0.18
TMEM116-202ENST00000437003 AARSP49588 968 aaKnown RBP eCLIP13.9□□□□□ -0.18
TMEM116-202ENST00000437003 USP14P54578 494 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms