RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 ICA1Q05084 483 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
VPS50-203ENST00000436177 PLS1Q14651 629 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 CCL14Q16627 93 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 MORN1Q5T089 497 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 LCORLQ8N3X6 602 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 MB21D1Q8N884 522 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 LPAR1Q92633 364 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 GPATCH3Q96I76 525 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 SLC5A4Q9NY91 659 aa9.34□□□□□ -0.91
VPS50-203ENST00000436177 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
VPS50-203ENST00000436177 FLOT1O75955 427 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 SYN1P17600 705 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 PTPREP23469 700 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 CCND3P30281 292 aaPredicted RBP9.33□□□□□ -0.92
VPS50-203ENST00000436177 COG2Q14746 738 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 Q3C1V9 767 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 USP6NLQ92738 828 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
VPS50-203ENST00000436177 CCDC17Q96LX7 622 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 BOLA2Q9H3K6 86 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 DCP1AQ9NPI6 582 aaPredicted RBP9.33□□□□□ -0.92
VPS50-203ENST00000436177 ATP8A2Q9NTI2 1148 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 RCAN3Q9UKA8 241 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 SIPA1L1O43166 1804 aa9.33□□□□□ -0.92
VPS50-203ENST00000436177 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 STRNO43815 780 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 CYP2D6P10635 497 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 ATP5JP18859 108 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 GABPAQ06546 454 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 GRB14Q14449 540 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 NCAPG2Q86XI2 1143 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 LBHD1Q9BQE6 289 aaPredicted RBP9.32□□□□□ -0.92
VPS50-203ENST00000436177 UBE2OQ9C0C9 1292 aaKnown RBP9.32□□□□□ -0.92
VPS50-203ENST00000436177 PRO3102Q9H379 93 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 BTBD7Q9P203 1132 aa9.32□□□□□ -0.92
VPS50-203ENST00000436177 TCRBV5S4A2TA0A5A2 114 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 KBTBD13C9JR72 458 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 TK2O00142 265 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 WDR46O15213 610 aaKnown RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 HRO43593 1189 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 CNMDO75829 334 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 HOXC6P09630 235 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 ADORA2AP29274 412 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 CYP2C19P33261 490 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 ADD2P35612 726 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 SPICE1Q8N0Z3 855 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 SHCBP1Q8NEM2 672 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 HAUS7Q99871 368 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 GDF15Q99988 308 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 MOV10L1Q9BXT6 1211 aaKnown RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 SPATC1LQ9H0A9 340 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 MROH8Q9H579 483 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 DDX20Q9UHI6 824 aaKnown RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 CTDP1Q9Y5B0 961 aaPredicted RBP9.31□□□□□ -0.92
VPS50-203ENST00000436177 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 FOCADQ5VW36 1801 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 PFASO15067 1338 aa9.31□□□□□ -0.92
VPS50-203ENST00000436177 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 USP17L21D6R901 530 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 DNM1LO00429 736 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 PRKAB2O43741 272 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 FCER1AP12319 257 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 AKR1B1P15121 316 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 ERCC3P19447 782 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 BMP8BP34820 402 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 OLFML2BQ68BL8 750 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 CLEC10AQ8IUN9 316 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 TDHQ8IZJ6 230 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 ARRDC4Q8NCT1 418 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 SENP6Q9GZR1 1112 aaPredicted RBP9.3□□□□□ -0.92
VPS50-203ENST00000436177 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 KANSL2Q9H9L4 492 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 ZNF287Q9HBT7 754 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 ARPP21Q9UBL0 812 aaPredicted RBP9.3□□□□□ -0.92
VPS50-203ENST00000436177 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
VPS50-203ENST00000436177 DOCK3Q8IZD9 2030 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 MYH1P12882 1939 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 A0A1W2PRG0 241 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 SLC25A27O95847 323 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 COL6A1P12109 1028 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms