RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RTN2O75298 545 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 IFIT1P09914 478 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 PBX1P40424 430 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 ZKSCAN8Q15776 578 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 NFRKBQ6P4R8 1299 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 DIS3L2Q8IYB7 885 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 OR8K1Q8NGG5 319 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 MRPL12P52815 198 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 SPATA4Q8NEY3 305 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 OR2W6PQ8NHA6 318 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 CYFIP2Q96F07 1278 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 RBM28Q9NW13 759 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 SKOR1P84550 965 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 THEMIS2Q5TEJ8 643 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 MSL1Q68DK7 614 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 CCDC51Q96ER9 411 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 JCADQ9P266 1359 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 ERICH2A1L162 156 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 TTF1Q15361 905 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 QPCTQ16769 361 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 C8orf74Q6P047 294 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 SPDYE1Q8NFV5 336 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 CCDC47Q96A33 483 aaKnown RBP8.32□□□□□ -1.08
CPSF6-202ENST00000435070 MLXIPQ9HAP2 919 aa8.32□□□□□ -1.08
CPSF6-202ENST00000435070 FRMPD1Q5SYB0 1578 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 GUCY2DQ02846 1103 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 PROCA1Q8NCQ7 364 aaPredicted RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 MYH8P13535 1937 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 SETD1BQ9UPS6 1966 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 ZNF213O14771 459 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 MDH1P40925 334 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 VAV2P52735 878 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 TRADDQ15628 312 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 MAEAQ7L5Y9 396 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 MS4A14Q96JA4 679 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 FAM167BQ9BTA0 163 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 EPB41L5Q9HCM4 733 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 CABP5Q9NP86 173 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 CHD2O14647 1828 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 EPHB4P54760 987 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 HLTFQ14527 1009 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 IQCEQ6IPM2 695 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 ZNF530Q6P9A1 599 aaPredicted RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 A0A087X0B3 334 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 KIF3CO14782 793 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 KCNJ18B7U540 433 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 CAND2O75155 1236 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 KIF5AQ12840 1032 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 IKQ13123 557 aaPredicted RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 KCNJ12Q14500 433 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 SPATS2Q86XZ4 545 aaKnown RBP8.31□□□□□ -1.08
CPSF6-202ENST00000435070 EHBP1Q8NDI1 1231 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 RPGRIP1Q96KN7 1286 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 AGPAT5Q9NUQ2 364 aa8.31□□□□□ -1.08
CPSF6-202ENST00000435070 hCG_1642624A0A1W2PR95 340 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 B4E1Z4 1266 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 MOCS3O95396 460 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CPLX4Q7Z7G2 160 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 SAAL1Q96ER3 474 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 HELLSQ9NRZ9 838 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 STIM2Q9P246 746 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 LRWD1Q9UFC0 647 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 FBXO2Q9UK22 296 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 LMTK2Q8IWU2 1503 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 FLT4P35916 1363 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PALLDQ8WX93 1383 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PXDNLA1KZ92 1463 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 RNF113AO15541 343 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 FAM107AO95990 144 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 PTPREP23469 700 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 NOSTRINQ8IVI9 506 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CCDC85AQ96PX6 553 aaPredicted RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 UBAC1Q9BSL1 405 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 SEPT11Q9NVA2 429 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 TRIM49BA6NDI0 452 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 TRIM21P19474 475 aaKnown RBP8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CUL4BQ13620 913 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 CDKAL1Q5VV42 579 aa8.3□□□□□ -1.08
CPSF6-202ENST00000435070 TBC1D1Q86TI0 1168 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms