RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 C12orf42Q96LP6 360 aa27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 NCOA5Q9HCD5 579 aaKnown RBP27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 ISY1Q9ULR0 285 aaKnown RBP27.04■■□□□ 1.92
SMARCAL1-208ENST00000434435 DHX16O60231 1041 aaKnown RBP27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 GJA5P36382 358 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 GNAQP50148 359 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 ZNF543Q08ER8 600 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 KIAA1755Q5JYT7 1200 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 FRMPD2Q68DX3 1309 aaPredicted RBP27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 RGMBQ6NW40 437 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 EMILIN3Q9NT22 766 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 MAD2L2Q9UI95 211 aa27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 BAZ2BQ9UIF8 2168 aaKnown RBP27.03■■□□□ 1.92
SMARCAL1-208ENST00000434435 A0A0G2JLL6 359 aaPredicted RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 CPLX1O14810 134 aa27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 WDR46O15213 610 aaKnown RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 ZBTB48P10074 688 aaPredicted RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 BMP3P12645 472 aa27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 CDC27P30260 824 aa27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 ZNF157P51786 506 aaPredicted RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 CPLX2Q6PUV4 134 aaKnown RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 PRRT2Q7Z6L0 340 aaPredicted RBP27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 RASAL3Q86YV0 1011 aa27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 HHIPL1Q96JK4 782 aa27.02■■□□□ 1.92
SMARCAL1-208ENST00000434435 PALM3A6NDB9 673 aaPredicted RBP27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 APLP1P51693 650 aa27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 ST3GAL1Q11201 340 aa27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 SNAPC2Q13487 334 aa27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 CUL4AQ13619 759 aa27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 SPRYD7Q5W111 196 aa27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 FAM217BQ9NTX9 383 aaPredicted RBP27.01■■□□□ 1.91
SMARCAL1-208ENST00000434435 GOLGA8HP0CJ92 632 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 VCAM1P19320 739 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 ADD1P35611 737 aaKnown RBP27■■□□□ 1.91
SMARCAL1-208ENST00000434435 DGKZQ13574 1117 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 FAM83BQ5T0W9 1011 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 TMTC3Q6ZXV5 915 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 KCTD1Q719H9 257 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 STAG2Q8N3U4 1231 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 NUP88Q99567 741 aaPredicted RBP27■■□□□ 1.91
SMARCAL1-208ENST00000434435 LZTS2Q9BRK4 669 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 GPCPD1Q9NPB8 672 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 CREBZFQ9NS37 354 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 RLFQ13129 1914 aa27■■□□□ 1.91
SMARCAL1-208ENST00000434435 KLRF2D3W0D1 207 aa26.99■■□□□ 1.91
SMARCAL1-208ENST00000434435 GADL1Q6ZQY3 521 aa26.99■■□□□ 1.91
SMARCAL1-208ENST00000434435 PROCA1Q8NCQ7 364 aaPredicted RBP26.99■■□□□ 1.91
SMARCAL1-208ENST00000434435 CDKL5O76039 1030 aa26.98■■□□□ 1.91
SMARCAL1-208ENST00000434435 PLEKHA8P1O95397 391 aa26.98■■□□□ 1.91
SMARCAL1-208ENST00000434435 HSP90AA1P07900 732 aaKnown RBP26.98■■□□□ 1.91
SMARCAL1-208ENST00000434435 SLC10A3P09131 477 aa26.98■■□□□ 1.91
SMARCAL1-208ENST00000434435 GTF2A2P52657 109 aa26.98■■□□□ 1.91
SMARCAL1-208ENST00000434435 MKRN3Q13064 507 aaKnown RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 IKQ13123 557 aaPredicted RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 FASTKD5Q7L8L6 764 aaKnown RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 LLPHQ9BRT6 129 aaKnown RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 RPAP3Q9H6T3 665 aaPredicted RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 DAXXQ9UER7 740 aaPredicted RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 COL11A1P12107 1806 aaPredicted RBP26.97■■□□□ 1.91
SMARCAL1-208ENST00000434435 TMEM232C9JQI7 657 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 IFNAR1P17181 557 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 STAT2P52630 851 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 TTBK2Q6IQ55 1244 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 FAM160B2Q86V87 743 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 NSUN7Q8NE18 718 aaKnown RBP26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 CCDC102AQ96A19 550 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 TANGO6Q9C0B7 1094 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 FEM1BQ9UK73 627 aa26.96■■□□□ 1.91
SMARCAL1-208ENST00000434435 CNTNAP5Q8WYK1 1306 aa26.95■■□□□ 1.91
SMARCAL1-208ENST00000434435 CETPP11597 493 aa26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 SMARCA1P28370 1054 aa26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 NTRK3Q16288 839 aa26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 CMTR1Q8N1G2 835 aaKnown RBP26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 SRBD1Q8N5C6 995 aaKnown RBP26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 CHURC1Q8WUH1 139 aa26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 INTS4Q96HW7 963 aaKnown RBP26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 SPZ1Q9BXG8 430 aa26.95■■□□□ 1.9
SMARCAL1-208ENST00000434435 PLA2G6O60733 806 aa26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 CTDNEP1O95476 244 aa26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 BTNL9Q6UXG8 535 aa26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 PAXIP1Q6ZW49 1069 aaPredicted RBP26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 UBA5Q9GZZ9 404 aa26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 AGTPBP1Q9UPW5 1226 aa26.94■■□□□ 1.9
SMARCAL1-208ENST00000434435 CCL15-CCL14A0A0B4J2E2 113 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 PTPDC1A2A3K4 754 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L15C9J2P7 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L13C9JLJ4 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L11C9JVI0 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L18D6R9N7 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L22D6RA61 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L17D6RBQ6 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L19D6RCP7 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L20D6RJB6 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 USP17L24Q0WX57 530 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 CCL15Q16663 113 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 TRIM22Q8IYM9 498 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 CCDC82Q8N4S0 544 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 MS4A4AQ96JQ5 239 aa26.93■■□□□ 1.9
SMARCAL1-208ENST00000434435 CPVLQ9H3G5 476 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms