RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 OSBPP22059 807 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 FAM83BQ5T0W9 1011 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 SENP2Q9HC62 589 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 MYPNQ86TC9 1320 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 PDHBP11177 359 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 HERVK_113P62684 666 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
CSTF3-202ENST00000431742 WTAPQ15007 396 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 POTEEQ6S8J3 1075 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 KAT14Q9H8E8 782 aa16.88■□□□□ 0.29
CSTF3-202ENST00000431742 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
CSTF3-202ENST00000431742 ERICH2A1L162 156 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
CSTF3-202ENST00000431742 RAD21O60216 631 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
CSTF3-202ENST00000431742 BCRP11274 1271 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 BMP3P12645 472 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 PSMA5P28066 241 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 LIFRP42702 1097 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 BLOC1S2Q6QNY1 142 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 C17orf99Q6UX52 265 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
CSTF3-202ENST00000431742 ZSWIM6Q9HCJ5 1215 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
CSTF3-202ENST00000431742 FLOT1O75955 427 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 CPA1P15085 419 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
CSTF3-202ENST00000431742 SLC1A4P43007 532 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 GCLCP48506 637 aaPredicted RBP16.86■□□□□ 0.29
CSTF3-202ENST00000431742 COG2Q14746 738 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 SGMS1Q86VZ5 419 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 FBXL16Q8N461 479 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
CSTF3-202ENST00000431742 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
CSTF3-202ENST00000431742 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
CSTF3-202ENST00000431742 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 GPR25O00155 361 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 PLA2G6O60733 806 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 DSG3P32926 999 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
CSTF3-202ENST00000431742 ZNF543Q08ER8 600 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 TROAPQ12815 778 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 RUFY3Q7L099 469 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 MORF4L1Q9UBU8 362 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 ADAMTS5Q9UNA0 930 aa16.85■□□□□ 0.29
CSTF3-202ENST00000431742 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 RBM25P49756 843 aaKnown RBP16.84■□□□□ 0.29
CSTF3-202ENST00000431742 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 BTNL9Q6UXG8 535 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 TMTC2Q8N394 836 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 TXNRD2Q9NNW7 524 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 RBPJLQ9UBG7 517 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 FEM1BQ9UK73 627 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 MTMR7Q9Y216 660 aa16.84■□□□□ 0.29
CSTF3-202ENST00000431742 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
CSTF3-202ENST00000431742 TMEM232C9JQI7 657 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 CNMDO75829 334 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 DDAH1O94760 285 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 STAT2P52630 851 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 GRM4Q14833 912 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 CCDC96Q2M329 555 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 ASPRV1Q53RT3 343 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 GPATCH4Q5T3I0 446 aaKnown RBP16.83■□□□□ 0.28
CSTF3-202ENST00000431742 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 REPS2Q8NFH8 660 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 ZNF236Q9UL36 1845 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 RABGAP1Q9Y3P9 1069 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
CSTF3-202ENST00000431742 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 FRMPD2Q68DX3 1309 aaPredicted RBP16.82■□□□□ 0.28
CSTF3-202ENST00000431742 TTBK2Q6IQ55 1244 aa16.82■□□□□ 0.28
CSTF3-202ENST00000431742 Q6ZUG5 572 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms