RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 KANSL2Q9H9L4 492 aa18.04■□□□□ 0.48
PTCD1-204ENST00000430982 FRMPD3Q5JV73 1810 aa18.04■□□□□ 0.48
PTCD1-204ENST00000430982 EEF2P13639 858 aaKnown RBP18.03■□□□□ 0.48
PTCD1-204ENST00000430982 VCAM1P19320 739 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 CHMLP26374 656 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
PTCD1-204ENST00000430982 HAND2P61296 217 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 LRRC26Q2I0M4 334 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 LHX8Q68G74 356 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 SIAH1Q8IUQ4 282 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 RUFY2Q8WXA3 655 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 USP6NLQ92738 828 aa18.03■□□□□ 0.48
PTCD1-204ENST00000430982 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTCD1-204ENST00000430982 ZMYM6O95789 1325 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 TSPY3P0CV98 308 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 TSPY8P0CW00 308 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 FAM47AQ5JRC9 791 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 PRUNE2Q8WUY3 3088 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 SOCS4Q8WXH5 440 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 P2RX7Q99572 595 aaKnown RBP18.02■□□□□ 0.48
PTCD1-204ENST00000430982 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 TOMM22Q9NS69 142 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 ANAPC4Q9UJX5 808 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTCD1-204ENST00000430982 TMX2Q9Y320 296 aa18.02■□□□□ 0.48
PTCD1-204ENST00000430982 LTBP2Q14767 1821 aa18.01■□□□□ 0.47
PTCD1-204ENST00000430982 RAD21O60216 631 aa18.01■□□□□ 0.47
PTCD1-204ENST00000430982 TFAP4Q01664 338 aa18.01■□□□□ 0.47
PTCD1-204ENST00000430982 IL25Q9H293 177 aa18.01■□□□□ 0.47
PTCD1-204ENST00000430982 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
PTCD1-204ENST00000430982 RAD50Q92878 1312 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 CYP2B6P20813 491 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 HERVK_113P62684 666 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
PTCD1-204ENST00000430982 CACNB2Q08289 660 aaPredicted RBP18■□□□□ 0.47
PTCD1-204ENST00000430982 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
PTCD1-204ENST00000430982 KIAA1755Q5JYT7 1200 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 CATSPERGQ6ZRH7 1159 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 TRMT44Q8IYL2 757 aaKnown RBP18■□□□□ 0.47
PTCD1-204ENST00000430982 SPICE1Q8N0Z3 855 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 NEDD1Q8NHV4 660 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 VCPKMTQ9H867 229 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 CDH23Q9H251 3354 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 MYH8P13535 1937 aa18■□□□□ 0.47
PTCD1-204ENST00000430982 IGKV6D-41A0A0C4DH26 115 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 TSPY2A6NKD2 308 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 RANBP6O60518 1105 aaKnown RBP17.99■□□□□ 0.47
PTCD1-204ENST00000430982 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 LPAR1Q92633 364 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 TXNRD2Q9NNW7 524 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 NYAP2Q9P242 653 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 TTC28Q96AY4 2481 aa17.99■□□□□ 0.47
PTCD1-204ENST00000430982 MUC3AQ02505 3323 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 ZNF213O14771 459 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 ORC4O43929 436 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
PTCD1-204ENST00000430982 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
PTCD1-204ENST00000430982 PLIN4Q96Q06 1357 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 PEX10O60683 326 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
PTCD1-204ENST00000430982 CCND3P30281 292 aaPredicted RBP17.97■□□□□ 0.47
PTCD1-204ENST00000430982 BMP2KLQ5H9B9 411 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 MORN1Q5T089 497 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
PTCD1-204ENST00000430982 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
PTCD1-204ENST00000430982 PRDM6Q9NQX0 595 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 MTMR4Q9NYA4 1195 aa17.97■□□□□ 0.47
PTCD1-204ENST00000430982 WDR46O15213 610 aaKnown RBP17.96■□□□□ 0.47
PTCD1-204ENST00000430982 SGSM2O43147 1006 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 TTLL1O95922 423 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 FGRP09769 529 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 MAPK4P31152 587 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
PTCD1-204ENST00000430982 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
PTCD1-204ENST00000430982 GPRC5AQ8NFJ5 357 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
PTCD1-204ENST00000430982 FLOT1O75955 427 aa17.95■□□□□ 0.46
PTCD1-204ENST00000430982 PTH1RQ03431 593 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms