RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 USP17L19D6RCP7 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L20D6RJB6 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 E9PSI1 815 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 RHBDL3P58872 404 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 TIMM10P62072 90 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 SMAD3P84022 425 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 USP17L24Q0WX57 530 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 TTC39AQ5SRH9 613 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 MAPKAPK5Q8IW41 473 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 TGFBRAP1Q8WUH2 860 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 API5Q9BZZ5 524 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 PORCNQ9H237 461 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 CABP5Q9NP86 173 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 AATFQ9NY61 560 aaKnown RBP eCLIP9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 ZBTB21Q9ULJ3 1066 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 NDUFB9Q9Y6M9 179 aa9.59□□□□□ -0.87
ECHDC1-207ENST00000430841 MAP3K7O43318 606 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 GNAI3P08754 354 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 USP5P45974 858 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 TFCP2Q12800 502 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 G3BP1Q13283 466 aaKnown RBP eCLIP9.58□□□□□ -0.881e-11■■■□□ 15.6
ECHDC1-207ENST00000430841 RAB3GAP1Q15042 981 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 ALDH1L2Q3SY69 923 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 MORN1Q5T089 497 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 CCDC174Q6PII3 467 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 CERS3Q8IU89 383 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 FOXP4Q8IVH2 680 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 SH3RF3Q8TEJ3 882 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 SSH1Q8WYL5 1049 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 NSUN4Q96CB9 384 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 KDM4CQ9H3R0 1056 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 TXNRD2Q9NNW7 524 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 COPRSQ9NQ92 184 aa9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 SAP30BPQ9UHR5 308 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-207ENST00000430841 FLT1P17948 1338 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 TMEM265A0A087WTH1 108 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 ST8SIA5O15466 376 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 DGAT1O75907 488 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 GH2P01242 217 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 RAG1P15918 1043 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 CYP2C19P33261 490 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 SHHQ15465 462 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 CCDC158Q5M9N0 1113 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 GJC2Q5T442 439 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 BADQ92934 168 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 TMUB1Q9BVT8 246 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 TANGO6Q9C0B7 1094 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 SEMA6BQ9H3T3 888 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 HMG20BQ9P0W2 317 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 RBPJLQ9UBG7 517 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
ECHDC1-207ENST00000430841 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 APBB1O00213 710 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 TNFRSF10AO00220 468 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 PEX10O60683 326 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 SLC19A1P41440 591 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 PLS1Q14651 629 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 TRIM60Q495X7 471 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 PALD1Q9ULE6 856 aa9.56□□□□□ -0.88
ECHDC1-207ENST00000430841 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 GDF9O60383 454 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 RARBP10826 455 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PRR20EP86478 221 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PRR20CP86479 221 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PRR20DP86480 221 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PRR20BP86481 221 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PRR20AP86496 221 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 FPGSQ05932 587 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PDE4DQ08499 809 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 GRB14Q14449 540 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 ANO1Q5XXA6 986 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 PI16Q6UXB8 463 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 SLC39A5Q6ZMH5 540 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 RNF180Q86T96 592 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 TTC6Q86TZ1 520 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 USP6NLQ92738 828 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 RPAP3Q9H6T3 665 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 TACC3Q9Y6A5 838 aa9.55□□□□□ -0.88
ECHDC1-207ENST00000430841 TRIM66O15016 1216 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 SEPT4O43236 478 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 STRNO43815 780 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 PQBP1O60828 265 aaKnown RBP9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 CLTBP09497 229 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 HOXC6P09630 235 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 VCAM1P19320 739 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 ADORA2AP29274 412 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms