RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 MORF4L1Q9UBU8 362 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 CPA4Q9UI42 421 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 ADAMTS5Q9UNA0 930 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
SMARCAL1-207ENST00000430374 PTPRFP10586 1907 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 IFIT3O14879 490 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 PRC1O43663 620 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 RAD21O60216 631 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 FLOT1O75955 427 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 PDHBP11177 359 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 BMP3P12645 472 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 MCCP23508 829 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 DSG3P32926 999 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 DHX32Q7L7V1 743 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 ANKRD13CQ8N6S4 541 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 PNMA1Q8ND90 353 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 TMEM87BQ96K49 555 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 KAT14Q9H8E8 782 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 PPP1R9AQ9ULJ8 1098 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 RABGAP1Q9Y3P9 1069 aa11.14□□□□□ -0.63
SMARCAL1-207ENST00000430374 ERICH2A1L162 156 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 CNMDO75829 334 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 SEC24BO95487 1268 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 LIFRP42702 1097 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 LACTBP83111 547 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 TMEM67Q5HYA8 995 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 GPRC5AQ8NFJ5 357 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 LY9Q9HBG7 655 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 FBXO28Q9NVF7 368 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 FEM1BQ9UK73 627 aa11.13□□□□□ -0.63
SMARCAL1-207ENST00000430374 VWA5AO00534 786 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 STAT2P52630 851 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 ANAPC15P60006 121 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 ERVK-24P63145 666 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 CAP1Q01518 475 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 ZNF543Q08ER8 600 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 WTAPQ15007 396 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 BTNL9Q6UXG8 535 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 SGMS1Q86VZ5 419 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 REPS2Q8NFH8 660 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 ATG4CQ96DT6 458 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 TM6SF1Q9BZW5 370 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 BTBD7Q9P203 1132 aa11.12□□□□□ -0.63
SMARCAL1-207ENST00000430374 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 GNRH1P01148 92 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 FDX1P10109 184 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 PSMA5P28066 241 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 CTGFP29279 349 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 TROAPQ12815 778 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 Q3C1V9 767 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 ASPRV1Q53RT3 343 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 KCTD1Q719H9 257 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 CD99L2Q8TCZ2 262 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 CHURC1Q8WUH1 139 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 SLC38A10Q9HBR0 1119 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 ZNF214Q9UL59 606 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 MYH8P13535 1937 aa11.11□□□□□ -0.63
SMARCAL1-207ENST00000430374 ATP2A1O14983 1001 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 PEX10O60683 326 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 DDAH1O94760 285 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 PSMC4P43686 418 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 OAZ1P54368 228 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 FCGRTP55899 365 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 CCNA1P78396 465 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 KIF22Q14807 665 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 TMEM132BQ14DG7 1078 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 AGXT2Q9BYV1 514 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 ARHGAP39Q9C0H5 1083 aa11.1□□□□□ -0.63
SMARCAL1-207ENST00000430374 SPATC1LQ9H0A9 340 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms