RNA–Protein interactions for RNA: ENST00000429534.1

SEC13P1-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1, humanhuman

BASIC

Gene SEC13P1, Length 948 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P1-201ENST00000429534 SLC1A4P43007 532 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 RCSD1Q6JBY9 416 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 FEM1BQ9UK73 627 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.33
SEC13P1-201ENST00000429534 ERICH2A1L162 156 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 PLA2G6O60733 806 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 FDX1P10109 184 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 MAPK4P31152 587 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 ERVK-24P63145 666 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 FBXO46Q6PJ61 603 aaPredicted RBP13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 COA7Q96BR5 231 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 PAGR1Q9BTK6 254 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
SEC13P1-201ENST00000429534 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
SEC13P1-201ENST00000429534 MCCP23508 829 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 KRT32Q14532 448 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 TRIM47Q96LD4 638 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 SRRDQ9UH36 339 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
SEC13P1-201ENST00000429534 ATAD5Q96QE3 1844 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 TNKSO95271 1327 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 VWA5AO00534 786 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 ZBED4O75132 1171 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 STAT2P52630 851 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 Q3C1V9 767 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 ENAHQ8N8S7 591 aaPredicted RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 FBXO28Q9NVF7 368 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
SEC13P1-201ENST00000429534 CNMDO75829 334 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 SLC25A27O95847 323 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 MCM5P33992 734 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 COPB2P35606 906 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 IKQ13123 557 aaPredicted RBP12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 SEC23AQ15436 765 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 STOX1Q6ZVD7 989 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 CYB5R4Q7L1T6 521 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 PNMA1Q8ND90 353 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 SHCBP1Q8NEM2 672 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
SEC13P1-201ENST00000429534 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 STRNO43815 780 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 SNHG28P0DPA3 235 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 PDHBP11177 359 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 CTGFP29279 349 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 HSPA4P34932 840 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 CAP1Q01518 475 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 PLS1Q14651 629 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 WTAPQ15007 396 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 TMEM67Q5HYA8 995 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 KCNB2Q92953 911 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 KIFC2Q96AC6 838 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 TMEM87BQ96K49 555 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 NEK1Q96PY6 1258 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 MROH8Q9H579 483 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
SEC13P1-201ENST00000429534 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
SEC13P1-201ENST00000429534 PRC1O43663 620 aa12.96□□□□□ -0.33
SEC13P1-201ENST00000429534 STAT3P40763 770 aa12.96□□□□□ -0.33
SEC13P1-201ENST00000429534 OAZ1P54368 228 aa12.96□□□□□ -0.33
SEC13P1-201ENST00000429534 ZNF543Q08ER8 600 aa12.96□□□□□ -0.33
SEC13P1-201ENST00000429534 IRF5Q13568 498 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms