RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 DZIP1Q86YF9 867 aaKnown RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 TRIM43Q96BQ3 446 aaPredicted RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 NSUN4Q96CB9 384 aaKnown RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 ZNF512BQ96KM6 892 aaPredicted RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 APBA2Q99767 749 aa10.41□□□□□ -0.74
HDAC1-202ENST00000428704 EPAS1Q99814 870 aa10.41□□□□□ -0.74
HDAC1-202ENST00000428704 CWC22Q9HCG8 908 aaKnown RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.41□□□□□ -0.74
HDAC1-202ENST00000428704 LTBP2Q14767 1821 aa10.41□□□□□ -0.74
HDAC1-202ENST00000428704 PHIPQ8WWQ0 1821 aa10.41□□□□□ -0.74
HDAC1-202ENST00000428704 ATAD5Q96QE3 1844 aa10.41□□□□□ -0.74
HDAC1-202ENST00000428704 SALL3Q9BXA9 1300 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 KBTBD13C9JR72 458 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 CDC45O75419 566 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 CYP2E1P05181 493 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-202ENST00000428704 MAPK4P31152 587 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 EPHB4P54760 987 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 HMGCS2P54868 508 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 RHBDL3P58872 404 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 IRX3P78415 501 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-202ENST00000428704 ADGRE1Q14246 886 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-202ENST00000428704 CCDC129Q6ZRS4 1044 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 ZFPM1Q8IX07 1006 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 GPRC5AQ8NFJ5 357 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 CCDC8Q9H0W5 538 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-202ENST00000428704 SNRKQ9NRH2 765 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 USP40Q9NVE5 1235 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 PTPRFP10586 1907 aa10.4□□□□□ -0.74
HDAC1-202ENST00000428704 MYH7P12883 1935 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 GPR37L1O60883 481 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 GSPT1P15170 499 aaKnown RBP10.39□□□□□ -0.75
HDAC1-202ENST00000428704 BTDP43251 543 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 FPGSQ05932 587 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 SPP2Q13103 211 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 TTC39AQ5SRH9 613 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 SPTY2D1Q68D10 685 aaPredicted RBP10.39□□□□□ -0.75
HDAC1-202ENST00000428704 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 SH3BP5LQ7L8J4 393 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 ERC1Q8IUD2 1116 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 RHPN1Q8TCX5 695 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 USP6NLQ92738 828 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 SNX21Q969T3 373 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 IDI2Q9BXS1 227 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 LRRCC1Q9C099 1032 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 DDX4Q9NQI0 724 aaKnown RBP10.39□□□□□ -0.75
HDAC1-202ENST00000428704 XIRP2A4UGR9 3374 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 DOCK3Q8IZD9 2030 aa10.39□□□□□ -0.75
HDAC1-202ENST00000428704 PEX10O60683 326 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 RAG1P15918 1043 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 ZAP70P43403 619 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 KCNQ1P51787 676 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 MFAP1P55081 439 aaKnown RBP10.38□□□□□ -0.75
HDAC1-202ENST00000428704 TFF2Q03403 129 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 SKIV2LQ15477 1246 aaKnown RBP10.38□□□□□ -0.75
HDAC1-202ENST00000428704 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 CCDC158Q5M9N0 1113 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 GPR142Q7Z601 462 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 PLEKHH3Q7Z736 793 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 ADGRA1Q86SQ6 560 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 AACSQ86V21 672 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 MICALL1Q8N3F8 863 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 PIH1D3Q9NQM4 214 aaKnown RBP10.38□□□□□ -0.75
HDAC1-202ENST00000428704 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
HDAC1-202ENST00000428704 MYH1P12882 1939 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 EPB41L2O43491 1005 aaKnown RBP10.37□□□□□ -0.75
HDAC1-202ENST00000428704 ENTPD3O75355 529 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 SLURP2P0DP57 97 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 ITGB8P26012 769 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 PBX2P40425 430 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 PDE1AP54750 535 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 TLE2Q04725 743 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 MAP2K5Q13163 448 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 SNX17Q15036 470 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 MORN1Q5T089 497 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 SLF2Q8IX21 1173 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 NAV1Q8NEY1 1877 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
HDAC1-202ENST00000428704 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 TBC1D2Q9BYX2 928 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 TXNRD2Q9NNW7 524 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 C11orf16Q9NQ32 467 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
HDAC1-202ENST00000428704 DDTLA6NHG4 134 aaPredicted RBP10.36□□□□□ -0.75
HDAC1-202ENST00000428704 SMIM22K7EJ46 135 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 APBB1O00213 710 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 CLTBP09497 229 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 ADCYAP1R1P41586 468 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 SLC4A3P48751 1232 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 HERVK_113P62684 666 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 GSTO1P78417 241 aa10.36□□□□□ -0.75
HDAC1-202ENST00000428704 ATP2B2Q01814 1243 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms