RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 KBTBD13C9JR72 458 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 KCNJ6P48051 423 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 TM4SF4P48230 202 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ZRSR2Q15696 482 aaKnown RBP8.18□□□□□ -1.1
CNOT4-206ENST00000428680 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 SUGCTQ9HAC7 445 aa8.18□□□□□ -1.1
CNOT4-206ENST00000428680 FOXN1O15353 648 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 ABL1P00519 1130 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 ELF1P32519 619 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 DGKZQ13574 1117 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 C1orf228Q6PIY5 440 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 FASTKD5Q7L8L6 764 aaKnown RBP8.17□□□□□ -1.1
CNOT4-206ENST00000428680 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 ALG1Q9BT22 464 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 EXOC1Q9NV70 894 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 POTECB2RU33 542 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 TRPC3Q13507 836 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 HLFQ16534 295 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 HOOK3Q86VS8 718 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 ANKRD13AQ8IZ07 590 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 CTNNBL1Q8WYA6 563 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-206ENST00000428680 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 HTATIP2Q9BUP3 242 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 DHX36Q9H2U1 1008 aaKnown RBP8.17□□□□□ -1.1
CNOT4-206ENST00000428680 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
CNOT4-206ENST00000428680 TBC1D9Q6ZT07 1266 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 SPICE1Q8N0Z3 855 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 CNNM3Q8NE01 707 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 LRRC2Q9BYS8 371 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 MYOZ2Q9NPC6 264 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 SLFN13Q68D06 897 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 APPBP2Q92624 585 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 UBN2Q6ZU65 1347 aa8.17□□□□□ -1.1
CNOT4-206ENST00000428680 USP17L12C9JPN9 530 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 USP17L21D6R901 530 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 LETM2Q2VYF4 491 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 CDCA5Q96FF9 252 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 RBM28Q9NW13 759 aaKnown RBP8.16□□□□□ -1.1
CNOT4-206ENST00000428680 ARPP21Q9UBL0 812 aaPredicted RBP8.16□□□□□ -1.1
CNOT4-206ENST00000428680 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 CCDC172P0C7W6 258 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 CETPP11597 493 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 ODR4Q5SWX8 454 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 EEPD1Q7L9B9 569 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 ZBTB8OSQ8IWT0 167 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 ALS2CR12Q96Q35 445 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 FAM205AQ6ZU69 1335 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 LBX1P52954 281 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 OTUD6AQ7L8S5 288 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 MNS1Q8NEH6 495 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 PI4KBQ9UBF8 816 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 LIMCH1Q9UPQ0 1083 aa8.16□□□□□ -1.1
CNOT4-206ENST00000428680 UQCRHLA0A096LP55 91 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 KCNQ3O43525 872 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 STAT6P42226 847 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 TNNI3KQ59H18 835 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 GREM2Q9H772 168 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 FPGT-TNNI3KV9GXZ4 949 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 H7C1W4 665 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 GCOM1H8Y6P7 765 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 PSMD14O00487 310 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 POLR2MP0CAP2 368 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 YARSP54577 528 aaKnown RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 ASIC1P78348 528 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 CFAP58Q5T655 872 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 HAUS3Q68CZ6 603 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 FAM83AQ86UY5 434 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 TSPYL6Q8N831 410 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 SPAG5Q96R06 1193 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 NRBP2Q9NSY0 501 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 RNF216Q9NWF9 866 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 SERPINB13Q9UIV8 391 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 ZNF215Q9UL58 517 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 CBFA2T2O43439 604 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 SORBS3O60504 671 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 PRKCSHP14314 528 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 LMAN1P49257 510 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 NFX1Q12986 1120 aaKnown RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 FAM160B1Q5W0V3 765 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.1
CNOT4-206ENST00000428680 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 CACNA1SQ13698 1873 aa8.15□□□□□ -1.1
CNOT4-206ENST00000428680 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.11
CNOT4-206ENST00000428680 GPAA1O43292 621 aa8.15□□□□□ -1.11
CNOT4-206ENST00000428680 GDF11O95390 407 aa8.15□□□□□ -1.11
CNOT4-206ENST00000428680 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.11
CNOT4-206ENST00000428680 PIDD1Q9HB75 910 aa8.15□□□□□ -1.11
CNOT4-206ENST00000428680 HOXC10Q9NYD6 342 aa8.15□□□□□ -1.11
CNOT4-206ENST00000428680 EZRP15311 586 aaKnown RBP8.14□□□□□ -1.11
CNOT4-206ENST00000428680 FBXO11Q86XK2 927 aa8.14□□□□□ -1.11
CNOT4-206ENST00000428680 CCDC112Q8NEF3 446 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms