RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	FMR1	Q06787	632 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	LONRF3	Q496Y0	759 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	AKAP4	Q5JQC9	854 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ALS2CL	Q60I27	953 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NEK1	Q96PY6	1258 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SAMSN1	Q9NSI8	373 aa	Known RBP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TRIM10	Q9UDY6	481 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PAPPA	Q13219	1627 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TOGARAM1	Q9Y4F4	1720 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	THSD7A	Q9UPZ6	1657 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658		A6NHS1	94 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ATP1A1	P05023	1023 aa	Known RBP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	GNAT1	P11488	350 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	OTUD7B	Q6GQQ9	843 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TOM1L2	Q6ZVM7	507 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	HDAC7	Q8WUI4	952 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	RAPGEF4	Q8WZA2	1011 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PPAN	Q9NQ55	473 aa	Known RBP	11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	GUCA1B	Q9UMX6	200 aa		11.7	□□□□□ -0.54
AFG3L1P-208	ENST00000427658		A0A1B0GVG6	124 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658		B4DLN1	442 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	HSF2BP	O75031	334 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	YEATS4	O95619	227 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	IMPDH2	P12268	514 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FER	P16591	822 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ABCD1	P33897	745 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MDH1	P40925	334 aa	Known RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FLII	Q13045	1269 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TRMT44	Q8IYL2	757 aa	Known RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ALS2CR12	Q96Q35	445 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ECHDC1	Q9NTX5	307 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TBC1D2B	Q9UPU7	963 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PCDHA5	Q9Y5H7	936 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MROH7-TTC4	A0A0A0MT08	1334 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PDE2A	O00408	941 aa	Predicted RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MYBL1	P10243	752 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MARCKS	P29966	332 aa	Predicted RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	CASP14	P31944	242 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	EVA1C	P58658	441 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	BLMH	Q13867	455 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FKBP15	Q5T1M5	1219 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	EMC10	Q5UCC4	262 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	EHBP1	Q8NDI1	1231 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	RPGRIP1	Q96KN7	1286 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ZIM3	Q96PE6	472 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TSC22D3	Q99576	134 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NCOA5	Q9HCD5	579 aa	Known RBP	11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	POLR3E	Q9NVU0	708 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	HMG20B	Q9P0W2	317 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	BLOC1S6	Q9UL45	172 aa		11.69	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NUTM2E	B1AL46	878 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ZSCAN9	O15535	394 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MFAP3L	O75121	409 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	RNF8	O76064	485 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ADAMTS2	O95450	1211 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SETSIP	P0DME0	302 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	GCLC	P48506	637 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	EZH2	Q15910	746 aa	Known RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FAM81A	Q8TBF8	368 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SLF1	Q9BQI6	1058 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	DMGDH	Q9UI17	866 aa	Known RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658		A0A1B0GTH6	734 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ZNF185	O15231	689 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	NR1D1	P20393	614 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ATP4A	P20648	1035 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ERVK-24	P63145	666 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MRPS25	P82663	173 aa	Known RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PPARD	Q03181	441 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	CCDC96	Q2M329	555 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	LACTB2	Q53H82	288 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	MSL1	Q68DK7	614 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	UBE3B	Q7Z3V4	1068 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	ARHGAP22	Q7Z5H3	698 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	METTL16	Q86W50	562 aa	Known RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PLEKHG4B	Q96PX9	1271 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SNRK	Q9NRH2	765 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	STRN4	Q9NRL3	753 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	BABAM1	Q9NWV8	329 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	TAOK2	Q9UL54	1235 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	LEMD3	Q9Y2U8	911 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	THRAP3	Q9Y2W1	955 aa	Known RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	KDM6A	O15550	1401 aa	Predicted RBP	11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SPATA31A1	Q5TZJ5	1347 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SPATA31A5	Q5VU36	1347 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SPATA31A7	Q8IWB4	1347 aa		11.68	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	PSMD14	O00487	310 aa		11.67	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	DIAPH2	O60879	1101 aa		11.67	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	SMIM24	O75264	130 aa		11.67	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	IL2RB	P14784	551 aa		11.67	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	FXR1	P51114	621 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
AFG3L1P-208	ENST00000427658	C2orf54	Q08AI8	447 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms