RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SH3BP5LQ7L8J4 393 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CABP5Q9NP86 173 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 GINM1Q9NU53 330 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CPA4Q9UI42 421 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 MYH8P13535 1937 aa9.64□□□□□ -0.87
SMARCAL1-206ENST00000427645 OTOFQ9HC10 1997 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 TLR2O60603 784 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 EVX2Q03828 476 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 COL9A3Q14050 684 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 APOA5Q6Q788 366 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 ERO1BQ86YB8 467 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 ENAHQ8N8S7 591 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 GTF3C6Q969F1 213 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 MAP3K14Q99558 947 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 LARP6Q9BRS8 491 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 IL17RBQ9NRM6 502 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 SMC3Q9UQE7 1217 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 COLQQ9Y215 455 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 KIF3AQ9Y496 699 aa9.63□□□□□ -0.87
SMARCAL1-206ENST00000427645 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 CPLX1O14810 134 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 CDKL5O76039 1030 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 TOP1P11387 765 aaKnown RBP9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 CETPP11597 493 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 NOVP48745 357 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 HMGN5P82970 282 aaKnown RBP9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 LACTBP83111 547 aaPredicted RBP9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 STK3Q13188 491 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 SNAPC2Q13487 334 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 MTFR1Q15390 333 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 ABCB5Q2M3G0 1257 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 TMEM179Q6ZVK1 233 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 FANCBQ8NB91 859 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 KAT14Q9H8E8 782 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 MTMR4Q9NYA4 1195 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 PLIN4Q96Q06 1357 aa9.62□□□□□ -0.87
SMARCAL1-206ENST00000427645 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 GOLGA8BA8MQT2 603 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 MPHOSPH10O00566 681 aaKnown RBP9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 DDAH1O94760 285 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 TTLL1O95922 423 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 AKR1B1P15121 316 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 PDCP20941 246 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 KIF5BP33176 963 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 GNAQP50148 359 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 FXR1P51114 621 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 NUBP1P53384 320 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 CCT2P78371 535 aaKnown RBP9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 NUCB2P80303 420 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 SCRN1Q12765 414 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 RCSD1Q6JBY9 416 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 CCDC83Q8IWF9 413 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 ZNF654Q8IZM8 581 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 NECAB1Q8N987 351 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 NKX2-3Q8TAU0 364 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 MKL1Q969V6 931 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 TRIM47Q96LD4 638 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 CHMP5Q9NZZ3 219 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 NYAP2Q9P242 653 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 SYNPO2Q9UMS6 1093 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 STX8Q9UNK0 236 aa9.61□□□□□ -0.87
SMARCAL1-206ENST00000427645 IGKV6D-41A0A0C4DH26 115 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 GOLGA8AA7E2F4 631 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 H0YGN5 161 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 PDHXO00330 501 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 NMT2O60551 498 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 LARGE1O95461 756 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 ASNSP08243 561 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 CYP2C8P10632 490 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 PSMC4P43686 418 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 PLCB2Q00722 1185 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 TROAPQ12815 778 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 PPIL2Q13356 520 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 KIF22Q14807 665 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 ARHGEF6Q15052 776 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 RTN1Q16799 776 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 C17orf99Q6UX52 265 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 CTCFLQ8NI51 663 aaPredicted RBP9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 NUP133Q8WUM0 1156 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 CEP95Q96GE4 821 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 TMEM47Q9BQJ4 181 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 LZTS2Q9BRK4 669 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms